Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thunnus_20orientalis_20[genbank_20GCA_5F000418415.1_202013-06-27] 133,062 sequences; 684,497,465 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq85215 181 2e-40 seq13608 84.2 4e-11 >seq85215 Length=7700 Score = 181 bits (200), Expect = 2e-40 Identities = 181/235 (77%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 68228 TTAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATA 68287 ||| |||||||| || || |||| || | || || |||||||| || |||||||| || Sbjct 6887 TTAGTTTCCTCCACGGAGACGCAGCACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTA 6828 Query 68288 ATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTC 68347 |||||||| || | |||||||| | ||||||||||||||| || | || || ||||| Sbjct 6827 GTCGGAGAGGGTGCGGCCATCTTCCAGCTGCTTCCCGGCGAAGATCAACCTCTGCTGGTC 6768 Query 68348 GGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGA 68407 || || |||||||| || || || ||||||||||||||| || |||||||| | Sbjct 6767 AGGAGGGATGCCTTCTTTATCCTGGATCTTTGCCTTGACGTTTTCAATGGTGTCACTGGG 6708 Query 68408 TTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 || || || || |||||||| || || ||||||||||| || || ||||||||| Sbjct 6707 CTCGACCTCTAAAGTGATGGTCTTGCCAGTGAGGGTCTTCACAAAGATCTGCATT 6653 >seq13608 Length=5623 Score = 84.2 bits (92), Expect = 4e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 84453 AGCGCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCG 84512 || ||||||||||||||||||| ||||| || ||||||| || ||||||||||||| Sbjct 3524 AGAGCCCGGTTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCG 3583 Query 84513 AGCCCCACATCGGG 84526 |||||||||| ||| Sbjct 3584 AGCCCCACATTGGG 3597 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 920089488502640