Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thunnus_20orientalis_20[genbank_20GCA_5F000418415.1_202013-06-27] 133,062 sequences; 684,497,465 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq30562 98.7 9e-16 >seq30562 Length=7703 Score = 98.7 bits (108), Expect = 9e-16 Identities = 111/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 20249 TGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCCAAACCC 20308 || || | ||| || || | || | ||||||||| ||||| ||||| ||||| | ||| Sbjct 1702 TGTGCGATCATGTATGTGAGCAGTGCATAGCTGGCGATGTTGAAAGGCACTCCGAGGCCC 1643 Query 20309 ATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCTACATAAAATTGA 20368 || || ||||| | ||| ||||||||||| || ||||||||||| || || || ||| Sbjct 1642 ATATCGCCCGAGCGCTGGTACAGCTGACACGACAGCTCACCGTCGCACACGTAGAACTGA 1583 Query 20369 CATAACAAGTGACAGGGCGGAAGCGCCAT 20397 || | ||| |||||||| || ||||| Sbjct 1582 CAGAGGGCGTGGCAGGGCGGCAGAGCCAT 1554 Score = 91.5 bits (100), Expect = 1e-13 Identities = 110/147 (75%), Gaps = 2/147 (1%) Strand=Plus/Minus Query 20527 GTACGCCGCCCCAAAGTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCCCCTCCCT 20586 |||| | || |||||||||||||||||||||||||| || ||||| | || |||||| Sbjct 711 GTACTCAGCGCCAAAGTGCCTCCACTGGAAACCGTACACGGGTCCGAGGTCGCCCTCCTC 652 Query 20587 TCTGTGCGCCAGGCCGCGCCCGGCCAGGAACTCCCTGGAGCCATTTTTGTCCCATATCTT 20646 ||||| | | |||| | | ||||||| |||| |||||| || ||||| ||| | Sbjct 651 TCTGTCTGTGAACCCGCTCTTGTCCAGGAAGTCCCGGGAGCCGTTGGCATCCCAGATCCT 592 Query 20647 GACTCCTGTTCT-TGAAAGCTCCCTGG 20672 || ||| |||| || |||||| ||| Sbjct 591 CACCCCT-TTCTCCGAGAGCTCCTTGG 566 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 440638675656080