Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thunnus_20orientalis_20[genbank_20GCA_5F000418415.1_202013-06-27] 133,062 sequences; 684,497,465 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq85215 129 1e-24 >seq85215 Length=7700 Score = 129 bits (142), Expect = 1e-24 Identities = 166/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 ||| || ||||| | || || ||||| | ||| || || ||||| || ||||||| Sbjct 6881 TCCTCCACGGAGACGCAGCACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 6822 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 ||| ||||| || ||||| | || || || |||||||||| | ||| || | || Sbjct 6821 GAGGGTGCGGCCATCTTCCAGCTGCTTCCCGGCGAAGATCAACCTCTGCTGGTCAGGAGG 6762 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 ||| ||||||||||||||||| || || || |||||||| || | || || | || || Sbjct 6761 GATGCCTTCTTTATCCTGGATCTTTGCCTTGACGTTTTCAATGGTGTCACTGGGCTCGAC 6702 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 || | ||||| ||||| || || || ||||| || || ||||||||| Sbjct 6701 CTCTAAAGTGATGGTCTTGCCAGTGAGGGTCTTCACAAAGATCTGCATT 6653 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1177643258086036