Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thunnus_20orientalis_20[genbank_20GCA_5F000418415.1_202013-06-27] 133,062 sequences; 684,497,465 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq97926 150 2e-31 seq44434 98.7 1e-15 seq123332 96.9 4e-15 >seq97926 Length=3727 Score = 150 bits (166), Expect = 2e-31 Identities = 882/1394 (63%), Gaps = 34/1394 (2%) Strand=Plus/Minus Query 113942 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAG 114001 ||||| ||| | ||||| | ||| | |||| ||||| |||| ||| || |||||||| Sbjct 1962 TAGATGTTGCTGGTGTAGGCCTCGATAGACTCGTTGTTGCCCAGGATCTGTGCGGTGGAC 1903 Query 114002 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 114061 ||||| ||||| || ||||| | || ||||| | | || | || || ||| Sbjct 1902 GCTGTCGGCATCGGGGCCATCAACAGACTGTTCCTCACGCCGTGTTTGGCGATCTTCTCC 1843 Query 114062 TTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTGC---CACATATCAAACTGG 114118 || || | |||||| | || | |||| | || | ||||| ||| ||||| Sbjct 1842 TTCAGCAGCTTCCAGTCCCAC---AGGTCTGTCGGCGTCTTCTCCCACATGTCATACTGG 1786 Query 114119 AGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCC 114178 ||||| || | | | | || || || | | |||||||| | ||| | | ||| Sbjct 1785 AGGATGCCCTTGCTGACAGGAGAGCCTTGGTACGTCTCGTAGGCGCCGTGCTCGCGGGCC 1726 Query 114179 AATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATT 114238 | ||| |||| ||||| |||| |||| || || ||||| || || | || | Sbjct 1725 AGATCGCAGCTTGCCTCCAGGGAAGCGTAGTAGATGGTCTCGAAGATCTGGATGTTGAGC 1666 Query 114239 GCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCT 114298 || |||||| | ||||| | | || || || || ||||||| || ||| Sbjct 1665 AGCTGAGCCTCGGGGCTTTCAAAGGGGTAACGCATCAGGATGAAGGCATCCGCCAGTCCT 1606 Query 114299 TGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTT-TCGAGCGGTCTCCACGGG 114357 |||||||||| || ||||| | || | | | || ||||| ||| || ||| || Sbjct 1605 TGGACACCGATCCCGATTGGCCTGTGACGCTTGTTGGACTTCTCG-GCTTCGGGCACTGG 1547 Query 114358 ATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATG 114417 || || || | || || | | | || || ||||| || || || || | | Sbjct 1546 GTAGAAGTTGATGTCAATGATCTTGTTCAGGTTTTTCACGATTACTTTGGTCACGTAGGC 1487 Query 114418 AAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGA 114477 || |||| | ||||| | || ||| |||| ||| | || ||||| || Sbjct 1486 CAGTTTTTTAAAGTCAAAGGTCCG---CTCAGGGGTGACGTACATGTTGAGAGCGATGGA 1430 Query 114478 CGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAA 114537 |||||||||||| || | ||| || | | ||||| || | || || || || | Sbjct 1429 CGCCAGATTACAGACCGCCACCTCGTCGTCACTGGTGTATTCAACGATCTCTGTGCAGAG 1370 Query 114538 ATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTT 114597 || | || |||||||||| |||| || || ||| |||| || || || || Sbjct 1369 GTTGCTGCATTTGATGGTGCCCAGATTCTGCTGGTTGCTCTTCCTGTTGCAGGCGTCTTT 1310 Query 114598 GTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGACAT- 114656 ||| |||||||| || || || || || || ||||||| | ||| || | ||| | | Sbjct 1309 GTACAGCATGTACGGTGTACCGGTTTCTGTCTGGGACTCAATAATGGCGTGCCACAGTTG 1250 Query 114657 CGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCTT 114716 | | | || || || ||| | || ||||||| ||| || || |||||||| || | Sbjct 1249 CTGAGCCTTCACCACACGC-TTGACCCGGCCCTCCTTCTCATATTTGGTGTAGAGCGCCT 1191 Query 114717 CAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACC 114776 ||||||| || ||| | ||| ||||| || |||| | || || | ||||||| Sbjct 1190 CAAACTCCTCCCCCCAGCACTCATCCAGCCCAGGAGCCTCGTTCGGACACATCAGAGACC 1131 Query 114777 A---TTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGA 114833 | ||| | ||| || | ||||||||||||||| |||||||| || | ||| Sbjct 1130 AGTCTTGGTTGCTTTCC---ACTCTCTTCATGAAGAGGTCCGGGATCCACAGGCCGTAGA 1074 Query 114834 AGAGATC-CCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCC 114892 | || || | | | ||| || | |||| || || || |||||| || || Sbjct 1073 AAAGGTCTCTGGCTCTTTGCTCCTCCTTCCCTGTG-TTTTTCTTCAGCTCCAAGAACTCA 1015 Query 114893 ATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCC----CTTACGACGACC 114948 | | ||| ||||||||| |||||||||| |||| | || || | | || Sbjct 1014 AACACATCAAAGTGCCACGGCTCCAGGTACATGGCGAAGGCTCCGGGTCTCTTGTTG-CC 956 Query 114949 AGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACCATC 115008 |||||| || || | || ||| || | || | ||||| || | | || | Sbjct 955 TCCCTGGTCGACGTAACGTGCCGTGTTGTTGTAAACTCTCAGCATGGGGACTAGGCCGTT 896 Query 115009 AGATTGGCCATTTGT-CCCCCGAATACGAGACTTATTGGCTCTGA--CATCATGGATGTG 115065 || | ||| || || || ||| | | || | ||||| || | || Sbjct 895 GGAGTTGCCGTTGGTGCCGGCGATGTAGCTCCCGGTT-GATCTGATGCAGC--TGACAGC 839 Query 115066 CATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGAT 115125 || ||||| || || || | || ||||| | ||||||| | | || || | || || Sbjct 838 CACGCCAATTCCTCCCGCTGATTTGGAGATGAGGGCGCACTGCTTCAGCGTGTCATAAAT 779 Query 115126 CCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCTTGG 115185 || ||||| ||| |||| | |||| ||||||||||| |||| || ||||| Sbjct 778 GCCTTCGATGCTGTCGTCCTTCATGGCGAGCAGGAAGCAGCTGGACAGCTGAGGCCTGTT 719 Query 115186 TGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCT-TGGGACATCTTAT 115244 || || ||||||||||| || || | |||||| ||||| || | | |||| | | Sbjct 718 GGTTCCTGCGTTGAAGAGAGTGGGGGAGGCGTGGGTGAAC-CACTTCTCTGACAGCAGGT 660 Query 115245 CGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAA 115304 ||||||||| | | | | ||| | || ||||| || |||| ||| || | ||| | Sbjct 659 TGTAGGTCTCGATGGCTTCATCAATATTTTTTCCGTGGATTCCGACCGACACTCTCATGA 600 Query 115305 ACATGTATTGGGGT 115318 ||||| || ||| Sbjct 599 GCATGTGCTGCGGT 586 >seq44434 Length=8273 Score = 98.7 bits (108), Expect = 1e-15 Identities = 77/92 (84%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 113942 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAG 114001 ||||| ||| | ||||| | ||||| | |||||||||| || | ||| ||||| |||||| Sbjct 1305 TAGATGTTGCTGGTGTAGGCCTCAATGGACTCATTGTTGCCGAGGATCTGGGCAGTGGAG 1364 Query 114002 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTT 114033 |||||||||||||| |||||||| || ||||| Sbjct 1365 GCTGTGGGCATGGGGGCCATGAGCAGACTGTT 1396 >seq123332 Length=1279 Score = 96.9 bits (106), Expect = 4e-15 Identities = 101/133 (76%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 126066 CCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCCCGCTTCT 126125 |||| || | | |||||| || || |||||| ||| || ||||| || || | ||||| Sbjct 981 CCTCATCTCTGCTGATGAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAGGCCTCTCTTCT 1040 Query 126126 TCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACACGCGAACG 126185 ||| |||||| || ||| || ||||| ||||||||||||||||||||| ||||| | Sbjct 1041 TCAGCCAGAAGATGGCAGCGAAGGAACCAGAGAAGAAGATTCCCTCCACAGCAGCGAAGG 1100 Query 126186 CAAAGAGACGCTC 126198 | | | |||||| Sbjct 1101 CCACCACACGCTC 1113 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596360036690960