Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thunnus_20orientalis_20[genbank_20GCA_5F000418415.1_202013-06-27] 133,062 sequences; 684,497,465 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq97926 192 7e-44 seq123332 89.7 6e-13 seq34237 82.4 9e-11 >seq97926 Length=3727 Score = 192 bits (212), Expect = 7e-44 Identities = 920/1437 (64%), Gaps = 44/1437 (3%) Strand=Plus/Plus Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671 || ||| ||||| ||||| | || || |||| ||||| || || |||||||| | Sbjct 587 CCGCAGCACATGCTCATGAGAGTGTCGGTCGGAATCCACGGAAAAAATATTGATGAAGCC 646 Query 111672 TTGGAGACATACGACAAGATGTCCC-GTGGTATGTTCATCCACGCAACACCAACCCTCTT 111730 | ||||| ||| || | |||| | || ||||| |||||| | || || ||||| Sbjct 647 ATCGAGACCTACAACCTGCTGTCAGAGAAGTG-GTTCACCCACGCCTCCCCCACTCTCTT 705 Query 111731 CAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGA 111790 |||||| || || || || || ||||||| || ||||| | || | ||||| || Sbjct 706 CAACGCAGGAACCAACAGGCCTCAGCTGTCCAGCTGCTTCCTGCTCGCCATGAAGGACGA 765 Query 111791 TTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGG 111850 ||| | |||||||| | ||| || | | || |||| ||||| || | || || Sbjct 766 CAGCATCGAAGGCATTTATGACACGCTGAAGCAGTGCGCCCTCATCTCCAAATCAGCGGG 825 Query 111851 TGGTATCGGGATGCACATCCATGATG--TCAGAGCCAACAAGTCTCGTATTAGAGGTACA 111908 || || || || || | || ||||| | | | | || || || Sbjct 826 AGGAATTGGCGTGGCTGTCA--GCTGCATCAGATCAACCGGGAGCTACATCGCCGGCACC 883 Query 111909 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 111968 || || | || | || | | || ||||| | || | ||| ||| || || || Sbjct 884 AACGGCAACTCCAACGGCCTAGTCCCCATGCTGAGAGTTTACAACAACACGGCACGTTAC 943 Query 111969 GTAAACCAAGCTGGGCGTCG-CAAG------GGATCTATCGCAGTCTATCTTGAGCCATG 112021 || |||| ||| | | |||| ||| | |||| | || || ||||| || Sbjct 944 GTCGACCA----GGGAGGCAACAAGAGACCCGGAGCCTTCGCCATGTACCTGGAGCCGTG 999 Query 112022 GCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCG 112081 |||| ||| | | |||||| | ||| || ||| ||| | |||||| | Sbjct 1000 GCACTTTGATGTGTTTGAGTTCTTGGAGCTGAAGAAAAACACAGGGAAGGAGGAG-CAAA 1058 Query 112082 GTGCC-GCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGG 112140 | ||| | || || |||| || || ||||| || || ||||||||||||||||| || Sbjct 1059 GAGCCAGAGACCTTTTCTACGGCCTGTGGATCCCGGACCTCTTCATGAAGAGAGT---GG 1115 Query 112141 AGAGTGGCAAT---TGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGA-TGCC 112196 | || | | |||||||| | ||||| || |||| || || || || ||| Sbjct 1116 AAAGCAACCAAGACTGGTCTCTGATGTGTCCGAACGAGGCTCCTGGGCTGGATGAGTGCT 1175 Query 112197 GTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCG 112256 | ||| ||||||||||| || |||||||| || || ||| | || | |||| | ||| Sbjct 1176 GGGGG-GAGGAGTTTGAGGCGCTCTACACCAAATATGAGAAGGAGGGCCGGGTCAA-GCG 1233 Query 112257 AC-GGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTAC 112315 |||| ||| | ||||| | || ||| | |||| || || || || ||||| Sbjct 1234 TGTGGTGAAGGCTCAGCAACTGTGGCACGCCATTATTGAGTCCCAGACAGAAACCGGTAC 1293 Query 112316 ACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGT 112375 ||| || ||||| |||||||||||||| ||| ||||| || || ||||| |||| Sbjct 1294 ACCGTACATGCTGTACAAAGACGCCTGCAACAGGAAGAGCAACCAGCAGAATCTGGGCAC 1353 Query 112376 GATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGC 112435 ||||| | ||||||||| ||||| ||| | |||| || | || ||| ||| Sbjct 1354 CATCAAATGCAGCAACCTCTGCACAGAGATCGTTGAATACACCAGTGACGACGAGGTGGC 1413 Query 112436 TGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATT 112495 || ||||| || || || ||||||||| || ||| || || ||| ||| || Sbjct 1414 GGTCTGTAATCTGGCGTCCATCGCTCTCAACATGTACGTCACCCCTGAG---CGGACCTT 1470 Query 112496 TGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTAT 112555 ||| | | ||||||| | | || || ||| || |||||||| |||| | || Sbjct 1471 TGACTTTAAAAAACTGGCCTACGTGACCAAAGTAATCGTGAAAAACCTGAACAAGATCAT 1530 Query 112556 TGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAAT 112615 ||| | || || ||||| || || || || || | | | ||| | ||||| Sbjct 1531 TGACATCAACTTCTACCCAGTGCCCGAAGCCGAGAAGTCCAACAAGCGTCACAGGCCAAT 1590 Query 112616 TGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTC 112675 || ||||||||||||| || ||||||| ||||| || || || | ||||| Sbjct 1591 CGGGATCGGTGTCCAAGGACTGGCGGATGCCTTCATCCTGATGCGTTACCCCTTTGAAAG 1650 Query 112676 CGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGA 112735 | ||| || || |||| | || || ||||| || || |||| | || || Sbjct 1651 CCCCGAGGCTCAGCTGCTCAACATCCAGATCTTCGAGACCATCTACTACGCTTCCCTGGA 1710 Query 112736 GGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGC 112795 ||| || | || |||| | | || | || || || | | || ||||| | Sbjct 1711 GGCAAGCTGCGATCTGGCCCGCGAGCACGGCGCCTACGAGACGTACCAAGGCTCTCCTG- 1769 Query 112796 TTCA-CAAGGG-GTGCTTCAATTTGATATGTGG--GAAGGTG-AGACCAAGCTTCACTAC 112850 ||| |||||| | || || | ||| |||||| |||| | ||| | || | Sbjct 1770 -TCAGCAAGGGCATCCTCCAGTATGACATGTGGGAGAAGACGCCGACAGACCT---GTGG 1825 Query 112851 GACTGGGACGCT-CTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGAT 112909 |||| ||| ||| || ||||| ||| | | || | | |||||||| ||||| Sbjct 1826 GACT-GGAAGCTGCTGAAGGAGAAGATCGCCAAACACGGCGTGAGGAACAGTCTGTTGAT 1884 Query 112910 GGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACC 112969 ||| || ||||| ||||| ||||||||||| ||| |||| || || || | | || | Sbjct 1885 GGCCCCGATGCCGACAGCGTCCACCGCACAGATCCTGGGCAACAACGAGTCTATCGAGGC 1944 Query 112970 CTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAA 113026 |||||| | |||||||| | ||| |||| | |||||||| ||| ||||| Sbjct 1945 CTACACCAGCAACATCTACACCCGCAGAGTCCTCTCCGGAGAGTTCCAGATCGTCAA 2001 >seq123332 Length=1279 Score = 89.7 bits (98), Expect = 6e-13 Identities = 78/97 (80%), Gaps = 0/97 (0%) Strand=Plus/Minus Query 102203 TGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGG 102262 ||| ||||| ||||||||||||||||||||| || || | ||||| |||||| |||| Sbjct 1090 TGTGGAGGGAATCTTCTTCTCTGGTTCCTTCGCTGCCATCTTCTGGCTGAAGAAGAGAGG 1031 Query 102263 TCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATC 102299 || ||||| || || ||||||||||||||| ||| Sbjct 1030 CCTGATGCCCGGCCTGACCTTCTCCAACGAGCTCATC 994 >seq34237 Length=22483 Score = 82.4 bits (90), Expect = 9e-11 Identities = 98/133 (74%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 102180 GAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCT 102239 |||||||| | || ||||| || || || |||||||||||||| || ||| || Sbjct 12870 GAGCGACTTGTGGCTTTTGCAGCAGTGGAAGGCATCTTCTTCTCTGGCTCATTCGCTGCC 12811 Query 102240 ATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATC 102299 || || ||||| |||||| |||| || ||||| || ||| || |||||| ||||| ||| Sbjct 12810 ATCTACTGGCTAAAGAAGAGAGGCCTAATGCCTGGCCTCACCTACTCCAATGAGCTGATC 12751 Query 102300 TCTCGTGACGAGG 102312 || || |||| Sbjct 12750 AGCCGGGATGAGG 12738 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 619709934684640