Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thunnus_20orientalis_20[genbank_20GCA_5F000418415.1_202013-06-27] 133,062 sequences; 684,497,465 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq34237 93.3 5e-14 >seq34237 Length=22483 Score = 93.3 bits (102), Expect = 5e-14 Identities = 98/129 (76%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 18983 CCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCATCAGTCCTCtttttt 19042 |||| || | || |||| ||||| || | || | |||||||| || ||||| || | Sbjct 12738 CCTCATCCCGGCTGATCAGCTCATTGGAGTAGGTGAGGCCAGGCATTAGGCCTCTCTTCT 12797 Query 19043 ttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTCTACTGCTGCAAAAG 19102 ||| |||| | || | ||| ||||| ||||| ||||| || ||||| ||||||||||||| Sbjct 12798 TTAGCCAGTAGATGGCAGCGAATGAGCCAGAGAAGAAGATGCCTTCCACTGCTGCAAAAG 12857 Query 19103 CAACTAGTC 19111 | || |||| Sbjct 12858 CCACAAGTC 12866 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 561173858485680