Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thunnus_20orientalis_20[genbank_20GCA_5F000418415.1_202013-06-27] 133,062 sequences; 684,497,465 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq97926 201 1e-46 >seq97926 Length=3727 Score = 201 bits (222), Expect = 1e-46 Identities = 911/1418 (64%), Gaps = 42/1418 (3%) Strand=Plus/Minus Query 146938 TTGCTAGTGAAAGGCTCAAAAGACTCATTATTGCCTAATATTTGGGCCGTGGTTGCGGTA 146997 ||||| ||| | | ||| | |||||| || ||||| | || || || |||| || || Sbjct 1956 TTGCTGGTGTAGGCCTCGATAGACTCGTTGTTGCCCAGGATCTGTGCGGTGGACGCTGTC 1897 Query 146998 GGCATGTACGCCACCAACAATGAATTTCGCAGACCGTACGCACGGATGTTGTCCTTCAA- 147056 ||||| |||| ||||| || | || |||| ||| || ||||||| Sbjct 1896 GGCATCGGGGCCATCAACAGACTGTTCCTCACGCCGTGTTTGGCGATCTTCTCCTTCAGC 1837 Query 147057 AGTTTGCCAGTCCCACATCGACGAGGGCGTCACGTTCCACATGTCGTACTGGAGCACTCC 147116 || || ||||||||||| | |||||| | ||||||||| |||||||| | || Sbjct 1836 AGCTT-CCAGTCCCACAGGTCTGTCGGCGTCTTCTCCCACATGTCATACTGGAGGATGCC 1778 Query 147117 TCGACTGGCGGGACTGCCAGCGAACGTAGTGTAGCTTCCGT-CGCGCTGCGCCAATTCAC 147175 ||| | ||| ||| | |||| |||| |||| | ||| | |||| || | Sbjct 1777 CTTGCTGACAGGAGAGCCTTGGTACGTCTCGTAGGCGCCGTGCTCGCGG-GCCAGATCGC 1719 Query 147176 AGCTTGCCTCGAGCGCTCCATAGTATATGGTTTCGGCGATTTGTTTGTTTAGGACGGTCG 147235 |||||||||| || | | ||||| ||||| ||| ||| || |||| || | | Sbjct 1718 AGCTTGCCTCCAGGGAAGCGTAGTAGATGGTCTCGAAGATCTGGATGTTGAGCAGCTGAG 1659 Query 147236 CTTCTTCGCTCTCGTAAGGCATACGCAGAAGCACAAAGGCATCGGCCAAACCCTGGATAC 147295 | || ||| || | || ||||| || | |||||||| |||| || |||| || Sbjct 1658 CCTCGGGGCTTTCAAAGGGGTAACGCATCAGGATGAAGGCATCCGCCAGTCCTTGGACAC 1599 Query 147296 CGACGCCGATAGGTC---GATGCTTTTCGT--TGCTGCGCTTCGCGCTCGCTATGGGATA 147350 ||| ||||| || | || |||| | | | || |||||| || | |||| || Sbjct 1598 CGATCCCGATTGGCCTGTGACGCTTGTTGGACTTCTCGGCTTCGGGCAC----TGGG-TA 1544 Query 147351 GTGGTTGCGATCAATAATCTTGTTGAGGTTACGCACTACAACTTTAGTTATTGTTTTGAG 147410 | |||| ||||| |||||||| ||||| ||| | ||||| || | || Sbjct 1543 GAAGTTGATGTCAATGATCTTGTTCAGGTTTTTCACGATTACTTTGGTCACGTAGGCCAG 1484 Query 147411 TTTCTCGAAATCATAAGTCCCGTCTTCGAC-ACGTACGCATTGGTTCACGGCGATAGACG 147469 ||| | || ||| | |||| || | |||||| || ||| | ||||| |||| Sbjct 1483 TTTTTTAAAGTCAAAGGTCCGCTCAGGGGTGACGTAC--AT--GTTGAGAGCGATGGACG 1428 Query 147470 CCAGATTGCAGACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATTTCGGCGCACAGGT 147529 ||||||| ||||| ||| ||| ||| | | |||| | ||||| || | ||| |||| Sbjct 1427 CCAGATTACAGACCGCCACCTCGTCGTCACTGGTGTATTCAACGATCTCTGTGCAGAGGT 1368 Query 147530 TGCTGCATTTTATGACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCACGCGTCTTTGA 147589 |||||||||| ||| |||| ||| ||||| ||||| |||| ||||| ||||||||| Sbjct 1367 TGCTGCATTTGATGGTGCCCAGATTCTGCTGGTTGCTCTTCCTGTTGCAGGCGTCTTTGT 1308 Query 147590 AGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCAACGATAAACCTATG---CAGGT 147646 | |||||||||||| ||||| || || | ||| |||| || ||| | Sbjct 1307 ACAGCATGTACGGTGTACCGGTTTCTGTCTGGGACTCA---ATAATGGCGTGCCACAGTT 1251 Query 147647 CCTGCGC--TC-GCACCCGCTGCCGATAGCGGCCCTCGTTTTCGTACCGCTCGTACAACC 147703 ||| || || ||| |||| || |||||||| || || || ||| | | Sbjct 1250 GCTGAGCCTTCACCACACGCT--TGA-CCCGGCCCTCCTTCTCATATTTGGTGTAGAGCG 1194 Query 147704 GCTCAAACTCGTCGCCGTAGCAATCGGCAAGGCCGGGACACTGATGCGGACACATCAGCG 147763 ||||||||| || || |||| || | || || ||| || | |||||||||||| | Sbjct 1193 CCTCAAACTCCTCCCCCCAGCACTCATCCAGCCCAGGAGCCTCGTTCGGACACATCAGAG 1134 Query 147764 ACCACATGTCGTCCGCGTT-AACGCGTCGCATAAACAGATCCGGCACCCACAGCGCGTAC 147822 |||| | | | || || || | ||| || || ||||| | |||||| |||| Sbjct 1133 ACCA-GTCTTGGTTGCTTTCCACTCTCTTCATGAAGAGGTCCGGGATCCACAGGCCGTAG 1075 Query 147823 ATAAGATCGC--GCGCTTTGCAATCCTCGGCGCCCATGTTGCGTTTCAAAT-TAAGCACG 147879 | ||| || | || |||||| ||||| || |||| |||| | ||| || Sbjct 1074 AAAAGGTCTCTGGCTCTTTGC--TCCTCCTTCCCTGTGTTTTTCTTCAGCTCCAAGAACT 1017 Query 147880 CTATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGCGCACC---TTTACGCTTT 147936 | | | | || |||||| || || | ||| | ||| | || || | | || Sbjct 1016 C-AAACACATCAAAGTGCCACGGCTCCAGGTACATGGCGAAGGCTCCGGGTCTCTTGTTG 958 Query 147937 CCGCCCTGGTCGACATGGCGCACCATGTTGTTAAACACGCGCACCATGGGTTCCAGGCCG 147996 || ||||||||||| | || || ||||||| | || | || |||||| | |||||| Sbjct 957 CCTCCCTGGTCGACGTAACGTGCCGTGTTGTTGTAAACTCTCAGCATGGGGACTAGGCCG 898 Query 147997 CTCGCAGTGCCGTTGGTGGAATTGATCTTGCTGCCGCGGGCTCGCACTTCGTGCACGTTA 148056 | | ||||||||||| ||| | ||| ||| | || | | || Sbjct 897 TTGGAGTTGCCGTTGGTGCCGGCGATGTAGCTCCCGGTTGATCTGATGCAGCTGACAGCC 838 Query 148057 ACGCCAATGCCGCCGCCGTACTTTGATATGGCAGCGCAATCGCCCAATGTCGTGTAGATG 148116 |||||||| || || | | || || ||| ||||| | || || || ||| Sbjct 837 ACGCCAATTCCTCCCGCTGATTTGGAGATGAGGGCGCACTGCTTCAGCGTGTCATAAATG 778 Query 148117 CCGTCGATGCTGTCGTTTTTGACGCCAAGCAAAAAACACGAACACATTTGCGGAATCCGC 148176 || ||||||||||||| || | | | |||| || || ||| || || | Sbjct 777 CCTTCGATGCTGTCGTCCTTCATGGCGAGCAGGAAGCAGCTGGACAGCTGAGGCCTGTTG 718 Query 148177 GTTCCCGCCGAGAAAAGGGTGGGACTCGCGTGCGTAAACAATTTTTGACTCATCATGCGA 148236 ||||| || ||| || ||||| ||||| || ||| | || | || || | Sbjct 717 GTTCCTGCGTTGAAGAGAGTGGGGGAGGCGTGGGTGAACCACTTCTCTGACAGCAGGTTG 658 Query 148237 TACGTCTCAATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCATGAGC 148296 || ||||| || || || || || | | ||||| || || | || || | ||||||| Sbjct 657 TAGGTCTCGATGGCTTCATCAATATTTTTTCCGTGGATTCCGACCGACACTCTCATGAGC 598 Query 148297 ATGTGCTGTGGTCGTTCGGCAACTTGATTGTTGATCTT 148334 |||||||| ||||| ||||| |||| ||||||||| Sbjct 597 ATGTGCTGCGGTCGCTCGGCCACTTTGCCGTTGATCTT 560 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475818464506320