Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thunnus_20orientalis_20[genbank_20GCA_5F000418415.1_202013-06-27] 133,062 sequences; 684,497,465 total letters Query= NC_026141.2 Length=4988 Score E Sequences producing significant alignments: (Bits) Value seq62033 105 2e-19 seq97832 98.7 3e-17 seq46225 98.7 3e-17 seq17992 98.7 3e-17 seq14970 98.7 3e-17 seq57594 96.9 1e-16 seq53276 91.5 5e-15 seq54459 87.8 6e-14 seq79997 78.8 3e-11 >seq62033 Length=16075 Score = 105 bits (116), Expect = 2e-19 Identities = 72/81 (89%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 2760 GTGTTTATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCT 2819 || ||||| || ||| |||||||||||||||||| ||||||||||||||||||||||||| Sbjct 10181 GTTTTTATCGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCT 10122 Query 2820 GGTTCAACCCCGGGCTTCAGC 2840 ||||| | |||||| ||| || Sbjct 10121 GGTTCGATCCCGGGTTTCGGC 10101 >seq97832 Length=8098 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 1360 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 1419 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 1420 CCGGGTTTCGGC 1431 >seq46225 Length=2325 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 615 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 674 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 675 CCGGGTTTCGGC 686 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 1886 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 1945 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 1946 CCGGGTTTCGGC 1957 >seq17992 Length=3299 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 3065 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 3006 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 3005 CCGGGTTTCGGC 2994 >seq14970 Length=3495 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 1311 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 1252 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 1251 CCGGGTTTCGGC 1240 >seq57594 Length=4458 Score = 96.9 bits (106), Expect = 1e-16 Identities = 65/73 (89%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827 ||| ||| |||||||| ||||||||| |||||||||||||||||||||||||||||| | Sbjct 4207 GGCCGAAATAGCTCAGCTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGAT 4148 Query 2828 CCCGGGCTTCAGC 2840 |||||| ||| || Sbjct 4147 CCCGGGTTTCTGC 4135 >seq53276 Length=606 Score = 91.5 bits (100), Expect = 5e-15 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827 ||| ||| |||||||| ||||||||| |||||||||||||||||||||||||| ||| | Sbjct 419 GGCCGAAATAGCTCAGCTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGCTTCGAT 478 Query 2828 CCCGGGCTTCAGC 2840 |||||| ||| || Sbjct 479 CCCGGGTTTCGGC 491 >seq54459 Length=5837 Score = 87.8 bits (96), Expect = 6e-14 Identities = 56/60 (93%), Gaps = 1/60 (2%) Strand=Plus/Plus Query 2778 GCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGG-TTCAACCCCGGGCTT 2836 |||||||||||||||||||||||||||||||||||||||||||| || | |||| ||||| Sbjct 5256 GCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTTGATCCCCTGGCTT 5315 >seq79997 Length=25495 Score = 78.8 bits (86), Expect = 3e-11 Identities = 51/56 (91%), Gaps = 0/56 (0%) Strand=Plus/Plus Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTT 2823 ||||||| ||| ||||||||||||| |||||||||||||||||||||| |||||| Sbjct 136 GGCTGAAATAGTTCAGTTGGGAGAGTGTTAGACTGAAGATCTAAAGGTCTCTGGTT 191 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15826533036990