Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thunnus_20orientalis_20[genbank_20GCA_5F000418415.1_202013-06-27] 133,062 sequences; 684,497,465 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq30562 165 9e-36 >seq30562 Length=7703 Score = 165 bits (182), Expect = 9e-36 Identities = 159/204 (78%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 146959 AGGGTGTGCACAAAGTCCCCCGGCTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGC 147018 || || | ||||| ||| | ||| || || || | ||| || | |||||| |||||| Sbjct 1741 AGAGTTTTCACAAGAGCCCTCACCTTGAGTCCTGTGATGTGTGCGATCATGTATGTGAGC 1682 Query 147019 AGCGAGTAGCTGGCTATGTTGAAGGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTAC 147078 || | |||||||| |||||||| || || || |||||||| || ||||| | ||||||| Sbjct 1681 AGTGCATAGCTGGCGATGTTGAAAGGCACTCCGAGGCCCATATCGCCCGAGCGCTGGTAC 1622 Query 147079 AGCTGGCACGAGAGCTCCCCGTCGGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGC 147138 ||||| ||||| ||||| |||||| |||||| ||||| || ||| |||||| |||||| Sbjct 1621 AGCTGACACGACAGCTCACCGTCGCACACGTAGAACTGACAGAGGGCGTGGCAGGGCGGC 1562 Query 147139 AGCGCCATGGCGGGCAGGTCCGCG 147162 || |||||| ||||||||| ||| Sbjct 1561 AGAGCCATGTAGGGCAGGTCTGCG 1538 Score = 96.9 bits (106), Expect = 4e-15 Identities = 107/140 (76%), Gaps = 6/140 (4%) Strand=Plus/Minus Query 147283 GCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTGC 147342 || |||||||||||||||||||| |||||||| || || |||||||| || ||||| Sbjct 704 GCGCCAAAGTGCCTCCACTGGAAACCGTACACGGGTCCGAGGTCGCCCTCCTCTCTGTCT 645 Query 147343 GAGAAGCCCGCCCGCTTG---AGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACT 147399 | ||| ||||| | ||| || || || |||| |||| ||| |||||||| | ||| Sbjct 644 GTGAA-CCCGCTC--TTGTCCAGGAAGTCCCGGGAGCCGTTGGCATCCCAGATCCTCACC 588 Query 147400 CCCTTGGCGGAGAGCTCCTT 147419 || || | ||||||||||| Sbjct 587 CCTTTCTCCGAGAGCTCCTT 568 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 582517498996800