Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thunnus_20orientalis_20[genbank_20GCA_5F000418415.1_202013-06-27] 133,062 sequences; 684,497,465 total letters Query= NC_028379.1 Length=205896 Score E Sequences producing significant alignments: (Bits) Value seq1639 147 3e-30 >seq1639 Length=7166 Score = 147 bits (162), Expect = 3e-30 Identities = 248/353 (70%), Gaps = 6/353 (2%) Strand=Plus/Minus Query 13692 GAGTTTCCCATCGCCTACTCGATCGTGATCCACCACAAGATCGAGATGTTCGAGCGCCTC 13751 || |||||||| |||||||| || |||||||| | ||||| |||||||| |||||||| Sbjct 1686 GACTTTCCCATTGCCTACTCCATGGTGATCCATGAGAAGATTGAGATGTTTGAGCGCCTT 1627 Query 13752 CTGAGGGCCATCTACGCCCCGCAGAACCTCTACTGCGTCCACGTGGACTCCAAGTCCGGC 13811 || | || | ||| | || |||||| ||||||| || || |||||| || ||| Sbjct 1626 CTACGAGCTGTTTACACTCCTCAGAACATCTACTGTGTGCATGTGGACCAGAAATCCACT 1567 Query 13812 GACGAGTTCATCCGG-GGC-GTCTCGGCCATCGCCAGGTGCTTCCCTAACGTGGCCCTGG 13869 | || || || | ||| || ||| || | ||||| ||||| ||| ||| Sbjct 1566 AAGGAATT--TCAGAAGGCTGTAGAGGCAATTGTTTCCTGCTTACCTAATGTGTTTGTGG 1509 Query 13870 CCCACCGGCT-GCACGACGTGGTGTACGGCTCCTGGAGTCGCGTGCAGGCCGACCTCAGC 13928 || | | | | || ||||| |||| ||| ||| | |||||||| || |||| | Sbjct 1508 CCAGTAGATTAGAAAGA-GTGGTATACGCCTCATGGTCAAGAGTGCAGGCGGATCTCAAC 1450 Query 13929 TGCATGTCGGACCTGGACGCCTCCCCCGTCAAGTGGAGGTACCTGCTCAACCTGTGCGGG 13988 |||||| || ||| | || | |||| |||||||||||||||||||| || ||| Sbjct 1449 TGCATGAAAGATCTGTTGGGGTCACACGTCCAGTGGAGGTACCTGCTCAACACCTGTGGG 1390 Query 13989 ATGGACTTCCCGCTCAAGACCAACCTGGAGATCGTGCGGGCGCTGAAGGCCCT 14041 | |||||||| |||| ||||| |||||| || | ||| |||||| |||| Sbjct 1389 ACTGACTTCCCCATCAAAACCAATAGGGAGATGGTTCAGGCTCTGAAGTCCCT 1337 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657643535557120