Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thunnus_20orientalis_20[genbank_20GCA_5F000418415.1_202013-06-27] 133,062 sequences; 684,497,465 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq85215 113 4e-20 >seq85215 Length=7700 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || || || || |||||| | || ||| | || || || || Sbjct 6654 ATGCAGATCTTTGTGAAGACCCTCACTGGCAAGACCATCACTTTAGAGGTCGAGCCCAGT 6713 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | ||||| ||| || || || ||||||||||| || || || || Sbjct 6714 GACACCATTGAAAACGTCAAGGCAAAGATCCAGGATAAAGAAGGCATCCCTCCTGACCAG 6773 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | || || | |||||| || || ||||||| | ||| | ||||| |||||| Sbjct 6774 CAGAGGTTGATCTTCGCCGGGAAGCAGCTGGAAGATGGCCGCACCCTCTCCGACTACAAC 6833 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 || || |||||||| ||| | ||| | || ||||| | || || || Sbjct 6834 ATCCAGAAGGAGTCCACCCTCCATCTTGTGCTGCGTCTCCGTGGAGG 6880 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434195011098240