Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thunnus_20orientalis_20[genbank_20GCA_5F000418415.1_202013-06-27] 133,062 sequences; 684,497,465 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq30562 152 4e-32 seq98104 141 7e-29 seq114199 96.9 3e-15 >seq30562 Length=7703 Score = 152 bits (168), Expect = 4e-32 Identities = 131/162 (81%), Gaps = 0/162 (0%) Strand=Plus/Minus Query 27208 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 27267 || || |||| ||| || |||||||| ||||| || | |||||||||||||| || || Sbjct 1714 AGTCCTGTGATGTGTGCGATCATGTATGTGAGCAGTGCATAGCTGGCGATGTTGAAAGGC 1655 Query 27268 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCATCGCTT 27327 || ||||| ||||| || ||||| | |||||| ||||||||||| ||||| || |||| Sbjct 1654 ACTCCGAGGCCCATATCGCCCGAGCGCTGGTACAGCTGACACGACAGCTCACCGTCGCAC 1595 Query 27328 ACGTAAAACTGACATATGGCGTGGCACGGAGGAAGAGCCATG 27369 ||||| |||||||| | ||||||||| || || ||||||||| Sbjct 1594 ACGTAGAACTGACAGAGGGCGTGGCAGGGCGGCAGAGCCATG 1553 >seq98104 Length=5295 Score = 141 bits (156), Expect = 7e-29 Identities = 152/201 (76%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 69117 ATGCAGGTCATCGGTTATGTGACGGGAACTCCATACCAATGTGACCAGCTTGTCCTGATG 69176 ||||||||||| ||| ||| ||| || ||| || |||||||||||| | |||||| Sbjct 2062 ATGCAGGTCATAGGTGTGGTGGAGGGCACCTCATGCCCGTGTGACCAGCTTATTCTGATG 2003 Query 69177 ACCTGCGAGGACCAGAAGGTGTACGGCTATGACGGAGACGAGCTGCATGTGGTGGCTAAC 69236 ||||| |||||| | ||| |||||| ||| || ||||| ||||||||| |||||||| Sbjct 2002 ACCTGTGAGGACAAAAAGCTGTACGCCTACGATGGAGAGGAGCTGCATTTGGTGGCTTCA 1943 Query 69237 TGTCTGGATCAGATGGGGGAAGAAGGAATAGCCTATCCTGCATTCCAGAGCTATTATCAT 69296 || | | ||| | | || | ||||| | ||||| |||| | ||||||||| || Sbjct 1942 AGTTGGAAGCAGCTATGTGACAAGGGAATTGAGTATCCAGCATGCAAGAGCTATTTCAAT 1883 Query 69297 GGGGAGGCCTTCAAACATATG 69317 |||||||||||| || ||||| Sbjct 1882 GGGGAGGCCTTCCAATATATG 1862 >seq114199 Length=1394 Score = 96.9 bits (106), Expect = 3e-15 Identities = 230/347 (66%), Gaps = 3/347 (1%) Strand=Plus/Minus Query 68971 TGTCTGAATATAGTCACAACAGCTTCCACCTACACAGTCCAGAGGGGTCCAAACTGACCA 69030 |||| |||| | |||||||| || | || | | ||||| || | | ||| | Sbjct 621 TGTCCAAATACAAACACAACAGGTTAACCTTAAAGAATCCAGCTGGCGCAACGTTGAGGA 562 Query 69031 TAGGACCCGTTGAGGACACAGAGTATAAAGACAGGCCTGCAGTGGTGAACGGATGGGGAA 69090 ||||| |||| ||||| || |||||| ||| ||||||||||||||| | Sbjct 561 TAGGAGGGCTTGACGACACCATTTACAAAGACGCAGATGCCAAGGTGAACGGATGGGGCA 502 Query 69091 AGTTTTATATCCCCACCGCCGTGACGATGCAGGTCATCGGTTATGTGACGGGAACTCCAT 69150 | || || | || || |||||||| | ||| ||| || ||| | | Sbjct 501 AATTCTACCTTCCAGATATAGTACACATGCAGGTTGTAGGTGTAGTGGAGGACACTTCCT 442 Query 69151 ACCAATGTGACCAGCTTGTCCTGATGACCTGCGAGGACCAGAAGGTGTACGGCTATGACG 69210 || ||||||| ||| ||||||||||| |||||| | || |||||| ||| || | Sbjct 441 GCCCGTGTGACCC---TGTTCTGATGACCTGTGAGGACAAAAATCTGTACGCCTACGATG 385 Query 69211 GAGACGAGCTGCATGTGGTGGCTAACTGTCTGGATCAGATGGGGGAAGAAGGAATAGCCT 69270 |||| ||||||||| |||||||| | || | | | | || ||| || | | Sbjct 384 GAGAGGAGCTGCATTTGGTGGCTTCAAGCTTGAAGCGACTATGTGACAAAGACATTGAGT 325 Query 69271 ATCCTGCATTCCAGAGCTATTATCATGGGGAGGCCTTCAAACATATG 69317 |||| |||| | |||| ||||| | ||||||||||||||| ||||| Sbjct 324 ATCCGGCATCCAAGAGATATTACAAGGGGGAGGCCTTCAAAGATATG 278 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 368907972714122