Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thunnus_20orientalis_20[genbank_20GCA_5F000418415.1_202013-06-27] 133,062 sequences; 684,497,465 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq85215 147 5e-30 >seq85215 Length=7700 Score = 147 bits (162), Expect = 5e-30 Identities = 166/220 (75%), Gaps = 7/220 (3%) Strand=Plus/Plus Query 177912 GTTAAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTG 177971 || ||||||| | || || ||||| || ||||| || || || ||||| | ||||| Sbjct 6648 GTAAAAATGC---AGATCTTTGTGAAGACCCTCACTGGCAAGACCATCACTTTAGAGGTC 6704 Query 177972 GAAAGCTCAG--ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCC 178029 || || ||| ||||||| || |||||||| |||||| ||||| |||||||| |||| Sbjct 6705 GA--GCCCAGTGACACCATTGAAAACGTCAAGGCAAAGATCCAGGATAAAGAAGGCATCC 6762 Query 178030 CTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG 178089 |||| |||||||| | | ||||||||||| || ||||| |||||||| | || || Sbjct 6763 CTCCTGACCAGCAGAGGTTGATCTTCGCCGGGAAGCAGCTGGAAGATGGCCGCACCCTCT 6822 Query 178090 CCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGT 178129 |||| || ||| |||| || || || || || |||||||| Sbjct 6823 CCGACTACAACATCCAGAAGGAGTCCACCCTCCATCTTGT 6862 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1201679010588028