Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xiphophorus_20couchianus_20[genbank_20GCA_5F001444195.1_202015-11- 17] 25 sequences; 708,396,389 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq7 86.0 6e-12 >seq7 Length=23593460 Score = 86.0 bits (94), Expect = 6e-12 Identities = 88/114 (77%), Gaps = 1/114 (1%) Strand=Plus/Minus Query 16982 AATC-CCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCG 17040 |||| ||||||||| |||||| || ||||| || |||| ||||||||| |||| Sbjct 3931330 AATCACCTCGTCTCGGCTGATGAGCTCGTTGCTGAAGGTCAGACCGGGCATCAGGCCTCT 3931271 Query 17041 TTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGAC 17094 ||||| | ||| || || ||||||||||| ||||| ||||| || ||||| || Sbjct 3931270 CTTCTTCAGCCAGAAGATGGCGGCGAACGAACCAGAGAAGAAGATTCCCTCCAC 3931217 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517545438267000