Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xiphophorus_20couchianus_20[genbank_20GCA_5F001444195.1_202015-11- 17] 25 sequences; 708,396,389 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq14 98.7 8e-16 >seq14 Length=22457735 Score = 98.7 bits (108), Expect = 8e-16 Identities = 127/173 (73%), Gaps = 2/173 (1%) Strand=Plus/Plus Query 18964 TCCCCTTAATGGTACTACCTCCATGTCACACGTTATGTCAGTTTTACGT-TGCAAACGGT 19022 ||||| |||||| | || || || ||| | | |||||||| || || ||||| ||| Sbjct 14523651 TCCCCATAATGGCGTTGCCCCCCTGCCACGCCCTCTGTCAGTTCTATGTCTGCAA-CGGG 14523709 Query 19023 GAATTATCCTGCCAAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGTTCAAC 19082 || | ||||| || | |||||| | || | || ||||| || ||||| || |||||| Sbjct 14523710 GAGCTGTCCTGTCAGCTGTACCAGCGCTCCGCCGACATGGGTCTGGGGGTGCCTTTCAAC 14523769 Query 19083 ATTGCTGGATATGCACTTCTTACCTACATAGTAGCGCATGTTACAGGACTTAA 19135 || || | ||||||||||| |||||||| | || || |||||||||| || Sbjct 14523770 ATCGCCAGCTATGCACTTCTCACCTACATGATTGCACACATTACAGGACTCAA 14523822 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399503878276125