Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xiphophorus_20couchianus_20[genbank_20GCA_5F001444195.1_202015-11- 17] 25 sequences; 708,396,389 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq10 104 6e-17 >seq10 Length=32721116 Score = 104 bits (114), Expect = 6e-17 Identities = 134/185 (72%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 364750 GCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCG 364809 ||||||||||||||||| || || || |||||||| || |||||||||| | |||| || Sbjct 10503624 GCGCCCATGCCCACGGCCTCCACCGCCCAGATCCTGGGCAACAACGAGTCCATCGAGGCG 10503565 Query 364810 TTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAG 364869 | || ||||| | || | ||| |||| || |||||||| || | | | || || Sbjct 10503564 TACACCAGCAACATCTACACCCGCAGGGTGCTGTCCGGAGAGTTCCAGATTGTCAACCCT 10503505 Query 364870 TACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATC 364929 |||| |||||||||| | || ||||| |||||| || ||||||||| | | Sbjct 10503504 CACCTCCTCAAGGATCTGACGGAGCGCGGCCTGTGGAACGAGGAGATGAAGAACAAGCTG 10503445 Query 364930 ATCGC 364934 ||||| Sbjct 10503444 ATCGC 10503440 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303353182519550