Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xiphophorus_20couchianus_20[genbank_20GCA_5F001444195.1_202015-11- 17] 25 sequences; 708,396,389 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq14 104 2e-17 >seq14 Length=22457735 Score = 104 bits (114), Expect = 2e-17 Identities = 122/163 (75%), Gaps = 4/163 (2%) Strand=Plus/Minus Query 20237 AGACCAGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGA 20296 || || |||| || |||| ||| || || | || | ||||||||| ||||| ||||| Sbjct 14523819 AGTCCTGTAATGTGTGCAATCATGTAGGTGAGAAGTGCATAGCTGGCGATGTTGAAAGGC 14523760 Query 20297 ACTCCCAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGT--CAG 20354 || |||| ||||||||| | || | ||| |||||||||||||| ||||| |||| ||| Sbjct 14523759 ACCCCCAGACCCATGTCGGCGGAGCGCTGGTACAGCTGACAGGACAGCTCCCCGTTGCAG 14523700 Query 20355 CTACATAAAATTGACATAACAAGTGACAGGGCGGAAGCGCCAT 20397 ||||| || ||||| | ||| ||||| || | |||||| Sbjct 14523699 --ACATAGAACTGACAGAGGGCGTGGCAGGGGGGCAACGCCAT 14523659 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441372662071000