Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xiphophorus_20couchianus_20[genbank_20GCA_5F001444195.1_202015-11- 17] 25 sequences; 708,396,389 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq10 545 4e-150 seq8 237 3e-57 seq20 188 1e-42 seq24 134 3e-26 seq23 132 9e-26 seq21 109 1e-18 seq7 107 4e-18 seq3 96.9 6e-15 seq13 95.1 2e-14 seq5 93.3 8e-14 >seq10 Length=32721116 Score = 545 bits (604), Expect = 4e-150 Identities = 1069/1566 (68%), Gaps = 38/1566 (2%) Strand=Plus/Plus Query 212858 CATGTCCTCGTTCCAGAGGCCCCTGGTCTCCAGGCACTTGACCAGGTGAGGGTTGACTAT 212917 ||| ||||||||||| ||||| | | ||| ||||| |||||||||||||| || Sbjct 10503457 CATCTCCTCGTTCCACAGGCCGCGCTCCGTCAGATCCTTGAGGAGGTGAGGGTTGACAAT 10503516 Query 212918 CTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCT 212977 |||||| || || || |||||||| | ||| | ||| ||||| | ||||||| Sbjct 10503517 CTGGAACTCTCCGGACAGCACCCTGCGGGTGTAGATGTTGCTGGTGTACGCCTCGATGGA 10503576 Query 212978 CTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACT 213037 ||||||||| ||||| ||||| || ||| ||| ||||||||||| |||| ||| || || Sbjct 10503577 CTCGTTGTTGCCCAGGATCTGGGCGGTGGAGGCCGTGGGCATGGGCGCCAGCAGCAGGCT 10503636 Query 213038 GTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTCCCATCTGCCAGA 213097 ||||||||| ||||| | |||||| | ||| ||||||||| | | Sbjct 10503637 GTTCCTCACGCCGTGTTTGCCGATCTTTTCCTTCAGCAGCTTCCAGTCCCAAAGGTC--- 10503693 Query 213098 CAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTGCTCACGGGGCT 213157 |||| |||| ||| | ||||||||| |||| | |||||| ||||| ||||| Sbjct 10503694 --GGTCGGCGTC-TTCTC---CCACATGTCGTACTGGAGGATGCCCTTGCTGACGGGCGA 10503747 Query 213158 GCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACGCCTGCAGGGC 213217 ||||| ||| | ||||||||| |||| ||| ||||||||| |||| |||||| Sbjct 10503748 GCCCTCGTACGTCTCGTAGGGGCCGAGCTCTGCGGCGAGCTCGCAGCTGGCCTCCAGGGC 10503807 Query 213218 AGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGGACGT--G 213275 |||| ||||||||| || || |||| |||||||| || || || ||||| | | Sbjct 10503808 GGCGTGGTAGATGGTCTCGAAGATCTGGATGTTGAGCAGCTGAGCTTC--GGGACTTTCG 10503865 Query 213276 AAGGGCATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGATGCCGATGGGT 213335 || || | ||| | ||| | || ||||| |||||||| ||||| ||||| || Sbjct 10503866 AACGGGTGCCGCATCAGGATGAAGGCGTCGGCCAGACCCTGGACGCCGATCCCGATCGGC 10503925 Query 213336 CTGTGTCTCAGGTTAGACTTGGAGCACTCCTCCAAG----GGGTAAAAGTTGCAGTCGAT 213391 ||||| | | ||| || | | | || || | ||||| ||||| |||||| Sbjct 10503926 CTGTGGCGCTTGTTGGAAGT----CTCAGCTTCAGGAACCGGGTAGTAGTTGATGTCGAT 10503981 Query 213392 GATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCGTGATTGAA 213451 ||||||||||||||| || |||||||| |||||| | || | | ||| Sbjct 10503982 GATCTTGTTGAGGTTTTTCACAATTACCTTGGTGACGGAGGCCAGCTTCTTGAAGTCGAA 10504041 Query 213452 CACGTAGCCCCCGTCCTGCACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAACGGC 213511 || | | | | || || || ||||||||| |||||||||||| ||||| Sbjct 10504042 A--GTCCGCTCTGGCGTG-ACGTACATGTTGAGGGCGATGGAGGCCAGGTTGCAGACGGC 10504098 Query 213512 CACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGT 213571 |||||| | | |||||||||| | ||| ||||| ||||||||||| |||||| Sbjct 10504099 CACCTCGTCCTTGCTGGTGTACTCCACCACCTCCGTGCAGAGGTTGCTGCACTTGATGGT 10504158 Query 213572 GCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATGTAGGGGGA 213631 |||||||||||| ||||| ||| |||| || |||||||||||||||||||||| Sbjct 10504159 GCCCAGGTTCTGCTGGTTGCTCTTCCGGTTGCAAGCGTCCTTGTAGAGCATGTAGGGGGT 10504218 Query 213632 CCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGAGGTACCTGGCCTTGACCACCCG 213691 |||||| || ||||||| | | || | |||||| | | ||||| ||||||| Sbjct 10504219 CCCGGTTTCGGTCTGGGACTCGATGATGGCGTACCAGAGCTGCTGCGCCTTCACCACCCT 10504278 Query 213692 CCTGACAGCTCCGGGCGTAGCCTCGTACTGTTCGTAGAGCTCGTTGAATTCGTGGCCCCA 213751 | | || |||| | | ||| || | |||||||| | ||| || | ||||| Sbjct 10504279 CTTCAC-TCTCCCTTCCT--TCTCATATTTGGTGTAGAGCTTCTCGAACTCCTCTCCCCA 10504335 Query 213752 GACCCTGTCCAGTCCCGGACAGGATGCGGGACACATGAGGCTCCAGTCCCCG-TCATCTC 213810 | | |||||| || ||||| ||||||||| | | ||||||| | | |||| Sbjct 10504336 GCACTCGTCCAGCCCAGGACACTCGCTGGGACACATCAAGGACCAGTCCTGGTTGCTCTC 10504395 Query 213811 TGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCC 213870 ||||||| |||||||||||| |||| ||||| ||| ||| ||||| |||| ||| Sbjct 10504396 -CACTCTCTTCATGAACAGGTCAGGGATCCACAAGGCGTAGAAAAGGTCTCTGGCTCTCT 10504454 Query 213871 TCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACG 213930 ||| ||| ||| | ||| || ||| || || ||||| || | ||| |||||| | Sbjct 10504455 GCTCCTCCTTTCCTGTGTTCTTCTTCAGCTCCAGGAAGTCGAACACGTCGAAGTGCCATG 10504514 Query 213931 GCTCCATGTAGATGGCAAAGGCGCCCGGCCTC---TTGCCGCCCTGGTCCACCAGCCTGG 213987 |||||| ||| ||||| ||||| || || ||| |||||||||||||| || || | Sbjct 10504515 GCTCCAGGTACATGGCGAAGGCCCCGGGTCTCTTGTTGCCGCCCTGGTCGACGTACCGAG 10504574 Query 213988 CCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGTCCGTTGGTTCCCG 214047 | ||||| | | | ||| | || |||| ||||||||| | |||||||| || | Sbjct 10504575 CGGTGTTGTTGTAAACTCTCAGCATCGGCACCAACCCGTTGGAGTTGCCGTTGGTGCCTG 10504634 Query 214048 CTATATACGAGCCGGAGGCCCTCAGGTTGCTCATGGAGAGCCCTATGCCACCGGCGTACT 214107 | || || || | | | | | ||||| | | ||||| || || ||| ||| Sbjct 10504635 CGATGTAGCTTCCCGTCGATCGGATGCAGCTCACCGCCACGCCTATCCCGCCAGCGGACT 10504694 Query 214108 TGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATGCTGTCATCTGTGA 214167 |||| || | || || || ||| || || |||||| | |||||||| || | | Sbjct 10504695 TGGAAATGAGCGCACACTGCTTCAGGGTGTCGTAGATGCCTTCGATGCTGTCGTCCTTCA 10504754 Query 214168 GGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTGGACGAGCCAGAGTTGAAAAGCGTGG 214227 | |||| |||||| || || ||||| |||| | | || | |||||| || || | Sbjct 10504755 TGGCGAGCAGGAAGCAACTGGACAGCTGCGGCCGGTTGGTCCCGGCGTTGAAGAGGGTCG 10504814 Query 214228 GGCTGGCATGGATCATAAACTTGTTAGAGAGGAGCCTGTAGGTCTCCAGGACTGAGGGGA 214287 | ||| ||| | | |||| | || ||||| |||||||||| | | | | | || Sbjct 10504815 GAGAGGCGTGGGTGAACCACTTCTCCGACAGGAGGTTGTAGGTCTCGACGGCGGCGTCGA 10504874 Query 214288 TGTCGTGCTTGTGGATCTGTAGAGCGCACCTCATCAGCATGTGCTGGGGCCTCTCTATGG 214347 |||| || ||| ||| | | |||||| ||||||||||| || | ||| || Sbjct 10504875 TGTCTCGCCCGTGAATCCCAACCGACACCCTCATGAGCATGTGCTGCGGTCGCTC---GG 10504931 Query 214348 GTCCTTT---GGGGCCCTTGAGCAGGTAGGAGCGCTCCAGAGTCTTGAACCCAAAGTAGG 214404 |||| | | ||| ||||||||||| ||||||||||||||||| || ||| || Sbjct 10504932 CCACTTTCCCGTTGATCTTCAGCAGGTAGGAACGCTCCAGAGTCTTGAAGCCGAAGAAGT 10504991 Query 214405 AGTAGG 214410 ||||| Sbjct 10504992 TGTAGG 10504997 >seq8 Length=25108055 Score = 237 bits (262), Expect = 3e-57 Identities = 196/239 (82%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 241389 GCTGACAGCCTTGGCACATGTGCCACAGGACCTCCTGTTTGAGTTGGGCCACCTGGTCCC 241448 |||||||||| || || |||| |||||||| ||||||||| |||||||||||||||| Sbjct 4516007 GCTGACAGCCGCTGCTCACGTGCGTCAGGACCTTCTGTTTGAGCTGGGCCACCTGGTCCC 4515948 Query 241449 GCAGAACGGACGCGGTATTGGACAGTCCTGCGTTGTCAGACTTGAGCACCTTCACTTTCT 241508 |||| || ||||| || ||||||| || |||||||| ||| || ||||| || |||| Sbjct 4515947 GCAGCACCGACGCCGTGCTGGACAGCCCGGCGTTGTCGCTCTTCAGAACCTTGACCTTCT 4515888 Query 241509 CCTCCAGCCGCGCGATGCGTTCCAGTTTGCGCCGGCGGCATTTGGTGGCTGCCAAGCGGT 241568 |||||||||| |||||||| |||||||||||||| | ||| |||||||| || | |||| Sbjct 4515887 CCTCCAGCCGGGCGATGCGCTCCAGTTTGCGCCGCCTGCACTTGGTGGCGGCGAGTCGGT 4515828 Query 241569 TCCGGAGTCTCTTACGTTCCGCCTTGATGCGTTCCTGGTCCTCCATGTCGATCGGAGAC 241627 |||| || | ||| |||||||| ||||||||||||||| |||| |||||| || ||| Sbjct 4515827 TCCGCAGCCGCTTGCGTTCCGCTTTGATGCGTTCCTGGGTGTCCAGGTCGATGGGGGAC 4515769 Score = 96.9 bits (106), Expect = 6e-15 Identities = 92/116 (79%), Gaps = 10/116 (9%) Strand=Plus/Minus Query 238926 TCTGTTTGAGTTGGGCCACCCGGTCCCGCAGAACGGACGCGGTATTGGACAGACCCGCGT 238985 |||||||||| ||||||||| |||||||||| || ||||| || ||||||| || |||| Sbjct 4515974 TCTGTTTGAGCTGGGCCACCTGGTCCCGCAGCACCGACGCCGTGCTGGACAGCCCGGCGT 4515915 Query 238986 TATC-------AGA--CTTGAGCATTCTCCTCCAGCCGCGCGATGCGTTCCAGCTT 239032 | || ||| ||||| | |||||||||||||| |||||||| ||||| || Sbjct 4515914 TGTCGCTCTTCAGAACCTTGACC-TTCTCCTCCAGCCGGGCGATGCGCTCCAGTTT 4515860 >seq20 Length=31600912 Score = 188 bits (208), Expect = 1e-42 Identities = 170/214 (79%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 241414 CAGGACCTCCTGTTTGAGTTGGGCCACCTGGTCCCGCAGAACGGACGCGGTATTGGACAG 241473 || ||| | ||||||||| ||||||||||| |||||||| | || || || || ||||| Sbjct 19221061 CATGACTTTCTGTTTGAGCTGGGCCACCTGTTCCCGCAGCAGAGAGGCCGTGTTCGACAG 19221002 Query 241474 TCCTGCGTTGTCAGACTTGAGCACCTTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAG 241533 ||| |||||||| | || | ||||||||| || ||||||| ||| |||||||| ||||| Sbjct 19221001 TCCGGCGTTGTCCGTTTTCAACACCTTCACCTTGTCCTCCAACCGGGCGATGCGCTCCAG 19220942 Query 241534 TTTGCGCCGGCGGCATTTGGTGGCTGCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTT 241593 |||||||| || || |||| ||||||| ||||||| || | ||| || |||||||| Sbjct 19220941 TTTGCGCCTCCGACACTTGGAAGCTGCCAGCCGGTTCCTCAGCCGCTTGCGCTCCGCCTT 19220882 Query 241594 GATGCGTTCCTGGTCCTCCATGTCGATCGGAGAC 241627 ||| | ||||||| ||||| |||||| || ||| Sbjct 19220881 GATCCTCTCCTGGTTCTCCAGGTCGATTGGGGAC 19220848 >seq24 Length=30408201 Score = 134 bits (148), Expect = 3e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 241418 ACCTCCTGTTTGAGTTGGGCCACCTGGTCCCGCAGAACGGACGCGGTATTGGACAGTCCT 241477 |||| ||| || || ||||||||||| ||||||| | | ||||| | ||| | Sbjct 8094400 ACCTTCTGCTTCAGCTGGGCCACCTGCTCCCGCAACATGTTGGCGGTGGACGCCAGCTCG 8094341 Query 241478 GCGTTGTCAGACTTGAGCACCTTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGTTTG 241537 | ||| | ||||| || |||||| || ||||||||||| | ||| || ||||| || Sbjct 8094340 GAGTTTTGGGACTTCAGGGTCTTCACCTTATCCTCCAGCCGGGAGATCCGCTCCAGCTTC 8094281 Query 241538 CGCCGGCGGCATTTGGTGGCTGCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTGATG 241597 | | ||||| |||| |||||| | |||||||| | | ||| | |||||||||||| Sbjct 8094280 CTCTTCCGGCACTTGGAGGCTGCGATGCGGTTCCTCATGCGCTTCCTCTCCGCCTTGATG 8094221 Query 241598 CGTTCCTGGTCCTCCATGTCGATCGGAGA 241626 || ||||||| ||||||||||||||| || Sbjct 8094220 CGCTCCTGGTTCTCCATGTCGATCGGGGA 8094192 Score = 113 bits (124), Expect = 8e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 241415 AGGACCTCCTGTTTGAGTTGGGCCACCTGGTCCCGCAGAACGGACGCGGTATTGGACAGT 241474 ||||||| ||| || | ||||||||||| || | ||| | | ||||| | ||| Sbjct 22998549 AGGACCTTCTGCTTTAACTGGGCCACCTGCTCTCTCAGCAGGCTGGCGGTGGAAGCCAGG 22998490 Query 241475 CCTGCGTTGTCAGACTTGAGCACCTTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGT 241534 | | ||| | | || ||| |||||| || ||||||||||| | ||| || |||||| Sbjct 22998489 TCGGTGTTCTGGGTTTTCAGCGTCTTCACCTTGTCCTCCAGCCGTGAGATCCGCTCCAGT 22998430 Query 241535 TTGCGCCGGCGGCATTTGGTGGCTGCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTG 241594 ||||||| || ||||||| ||| || | ||||| | ||| | ||| || || || ||| Sbjct 22998429 TTGCGCCTCCGACATTTGGAGGCGGCGATCCGGTTTCTGAGCCGCTTCCGCTCGGCTTTG 22998370 Query 241595 ATGCGTTCCTGGTCCTCCATGTCGATCGGAGA 241626 || || ||||| |||||||||| ||||| Sbjct 22998369 ATCCGCTCCTGCGAGTCCATGTCGACGGGAGA 22998338 Score = 87.8 bits (96), Expect = 3e-12 Identities = 86/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 38960 CACCAGCTCCCACCTGTTGGCGGAGAAGAGCAGGTGGACTGCGTGGTCGTCCAGCTCCGT 39019 |||||||||||| | ||| || ||||| || ||||| || | |||||| ||||| || | Sbjct 3451499 CACCAGCTCCCAGCGGTTCGCAGAGAACAGGAGGTGCACCGTGTGGTCCTCCAGGTCACT 3451558 Query 39020 CTTACTCTCCAGGTACGAGCTGATCATCTTTCCGATGGTAGTGGTTCTGTC 39070 ||| |||||||||| | |||||| | || || ||||| ||| | ||||| Sbjct 3451559 CTTCTTCTCCAGGTAGGCGCTGATAAGCTGCCCAATGGTTGTGCTCCTGTC 3451609 >seq23 Length=24361341 Score = 132 bits (146), Expect = 9e-26 Identities = 172/238 (72%), Gaps = 0/238 (0%) Strand=Plus/Plus Query 241390 CTGACAGCCTTGGCACATGTGCCACAGGACCTCCTGTTTGAGTTGGGCCACCTGGTCCCG 241449 ||| ||||| | | | ||| | || ||||| ||| ||||| ||||||||||| | ||| Sbjct 23528027 CTGGCAGCCGTTGGTGACGTGACTCATGACCTTCTGCTTGAGCTGGGCCACCTGCTGCCG 23528086 Query 241450 CAGAACGGACGCGGTATTGGACAGTCCTGCGTTGTCAGACTTGAGCACCTTCACTTTCTC 241509 ||| | || ||||| | ||| | | ||| | ||| || |||||||| ||||| Sbjct 23528087 CAGCATGGCGGCGGTGGACGCCAGGTCCGAGTTCTGGTTCTTCAGGACCTTCACCTTCTC 23528146 Query 241510 CTCCAGCCGCGCGATGCGTTCCAGTTTGCGCCGGCGGCATTTGGTGGCTGCCAAGCGGTT 241569 |||||| || | ||| || ||||| || ||| |||||| |||| || || | |||||| Sbjct 23528147 CTCCAGGCGGGAGATCCGCTCCAGCTTCCGCTTGCGGCACTTGGACGCGGCGATGCGGTT 23528206 Query 241570 CCGGAGTCTCTTACGTTCCGCCTTGATGCGTTCCTGGTCCTCCATGTCGATCGGAGAC 241627 || || |||| ||||| || ||||| || ||||| ||||| |||||| || ||| Sbjct 23528207 GCGCAGCTTCTTGCGTTCGGCTTTGATTCGCTCCTGCGTCTCCAGGTCGATGGGGGAC 23528264 >seq21 Length=29933922 Score = 109 bits (120), Expect = 1e-18 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 241418 ACCTCCTGTTTGAGTTGGGCCACCTGGTCCCGCAGAACGGACGCGGTATTGGACAGTCCT 241477 |||| ||| || || |||||||| || |||| ||| || || || || ||| | Sbjct 1382185 ACCTTCTGCTTCAGCTGGGCCACTTGCTCCCTCAGCACACTGGCAGTGGAGGCCAGCTCG 1382126 Query 241478 GCGTTGTCAGACTTGAGCACCTTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGTTTG 241537 | ||| | | ||| || || || |||||||||||||| | ||| | ||||| || Sbjct 1382125 GTGTTCTGCGTCTTCAGGGTTTTGACCTTCTCCTCCAGCCGGGAGATCCTCTCCAGCTTC 1382066 Query 241538 CGCCGGCGGCATTTGGTGGCTGCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTGATG 241597 | | ||| || || | ||| || | |||||||| || | || || |||||||||||| Sbjct 1382065 CTCTTGCGACACTTCGAGGCGGCTATCCGGTTCCGCAGCTTTTTCCGCTCCGCCTTGATG 1382006 Query 241598 CGTTCCTGGTCCTCCATGTCGATCGGAGAC 241627 || ||||||| ||||||||||| |||||| Sbjct 1382005 CGCTCCTGGTTGTCCATGTCGATGGGAGAC 1381976 >seq7 Length=23593460 Score = 107 bits (118), Expect = 4e-18 Identities = 95/119 (80%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 48155 TCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGTTTG 48214 ||||| |||||||||||| ||||| |||| ||||| ||||| | || |||| || Sbjct 3931323 TCGTCTCGGCTGATGAGCTCGTTGCTGAAGGTCAGACCGGGCATCAGGCCTCTCTTCTTC 3931264 Query 48215 AGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAACGC 48273 |||||||| || || ||||| || |||||||||||||| |||||||| || ||||| || Sbjct 3931263 AGCCAGAAGATGGCGGCGAACGAACCAGAGAAGAAGATTCCCTCCACAGCGGCGAAGGC 3931205 Score = 87.8 bits (96), Expect = 3e-12 Identities = 66/78 (85%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 |||||| ||||| || | |||||||||||||| ||||||||||||| || |||||||| Sbjct 3932159 CTGGTACTCCCCGACCCGCTTCTCAAAGAAGTTGGTCTTCCCCTCCAGAGAAATGTTCTC 3932100 Query 47899 CATGAAGAGGAAGGGGTT 47916 ||||||| ||| ||||| Sbjct 3932099 CATGAAGTCGAACGGGTT 3932082 Score = 87.8 bits (96), Expect = 3e-12 Identities = 66/78 (85%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 |||||| ||||| || | |||||||||||||| ||||||||||||| || |||||||| Sbjct 3939066 CTGGTACTCCCCGACCCGCTTCTCAAAGAAGTTGGTCTTCCCCTCCAGAGAAATGTTCTC 3939125 Query 47899 CATGAAGAGGAAGGGGTT 47916 ||||||| ||| ||||| Sbjct 3939126 CATGAAGTCGAACGGGTT 3939143 >seq3 Length=27041879 Score = 96.9 bits (106), Expect = 6e-15 Identities = 103/136 (76%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 212918 CTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCT 212977 ||| || || |||||||||||||| | ||| | ||| ||||| | ||| ||| Sbjct 15254224 CTGAAACTCTCCTGAGAGCACCCTGCGAGTGTAGATGTTGCTTGTGTATGCCTCAATGGA 15254283 Query 212978 CTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACT 213037 ||| ||||| |||| ||||| |||||| ||||||||||| || |||| || ||||| Sbjct 15254284 CTCATTGTTACCCAAGATCTGGGCAGTGGAAGCTGTGGGCATTGGGGCCAAAAGCAGACT 15254343 Query 213038 GTTCCTCACTCCGTGC 213053 ||||||||| |||||| Sbjct 15254344 GTTCCTCACACCGTGC 15254359 Score = 84.2 bits (92), Expect = 4e-11 Identities = 118/166 (71%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 213527 TGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTG 213586 |||||| || | ||||| ||||| || |||||| | |||||||||||| || || || Sbjct 15255858 TGTGTATTCAACAATCTCTGTGCAGAGATTGCTGGACTTGATGGTGCCCAGATTTTGCTG 15255917 Query 213587 GTTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTG 213646 ||| | ||| |||| | ||||||||||||||||| || | || |||||| ||| Sbjct 15255918 GTTGGTCTTCCTGTTGCAGGCGTCCTTGTAGAGCATGTACGGCGTACCCGTCTCTGTCTG 15255977 Query 213647 GGACACCAGTATCTGGCTCCAGAGGTACCTGGCCTTGACCACCCGC 213692 ||| | | || | |||||| | | ||||| ||||| ||| Sbjct 15255978 CGACTCGATGATGGCGTACCAGAGCTGCTGAGCCTTCACCACACGC 15256023 >seq13 Length=28566418 Score = 95.1 bits (104), Expect = 2e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 241415 AGGACCTCCTGTTTGAGTTGGGCCACCTGGTCCCGCAGAACGGACGCGGTATTGGACAGT 241474 ||||||| ||| || | ||||||||||| || | ||| | | ||||| | ||| Sbjct 5554394 AGGACCTTCTGCTTTAACTGGGCCACCTGCTCTCTCAGCAGGCTGGCGGTGGAAGCCAGG 5554335 Query 241475 CCTGCGTTGTCAGACTTGAGCACCTTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGT 241534 | | ||| | | || || |||||| || ||||||||||| | ||| || |||||| Sbjct 5554334 TCAGTGTTCTGGGTTTTCAGTGTCTTCACCTTGTCCTCCAGCCGTGAGATCCGCTCCAGT 5554275 Query 241535 TTGCGCCGGCGGCATTTGGTGGCTGCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTG 241594 ||| ||| || ||||||| | | || | ||||| | ||| | ||| || || || ||| Sbjct 5554274 TTGTGCCTCCGACATTTGGAGTCGGCGATCCGGTTTCTGAGCCGCTTCCGCTCGGCTTTG 5554215 Query 241595 ATGCGTTCCTGGTCCTCCATGTCGATCGGAGA 241626 || || ||||| |||||||| | ||||| Sbjct 5554214 ATCCGCTCCTGCGAGTCCATGTCAACGGGAGA 5554183 >seq5 Length=26266306 Score = 93.3 bits (102), Expect = 8e-14 Identities = 92/119 (77%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 48155 TCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGTTTG 48214 || |||| ||| ||||| |||||||| || ||||| ||||||| || |||| || Sbjct 12374827 TCATCCCTGCTAATGAGTTCGTTGGAGTAGGTAAGACCTGGCATGAGGCCTCTCTTCTTC 12374886 Query 48215 AGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAACGC 48273 |||||| | || || ||||| ||||| |||||||| || ||||||||||| || || || Sbjct 12374887 AGCCAGTAGATAGCAGCGAATGAGCCTGAGAAGAAAATCCCCTCCACTGCTGCAAAAGC 12374945 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931532508896000