Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xiphophorus_20couchianus_20[genbank_20GCA_5F001444195.1_202015-11- 17] 25 sequences; 708,396,389 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq25 93.3 8e-14 >seq25 Length=55650406 Score = 93.3 bits (102), Expect = 8e-14 Identities = 119/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 58377 GAGCATTATGGTGGTACTATATATCTAAAGGGATAGAATACTTAGATACAGTGTTTTTCA 58436 |||| | |||||||| | || || ||||| || || ||| | || ||||||||||||| Sbjct 33226989 GAGCTCTCTGGTGGTATTTCATCTCCAAAGGCATTGAGTACCTGGACACAGTGTTTTTCA 33227048 Query 58437 TACTTAGGAAAAAGTTTAATCATGTTAGCTTTCTACACGTATATCATCATTTTACTATGT 58496 | || ||||||||||| || || || | ||| || ||||| || || || | || |||| Sbjct 33227049 TTCTGAGGAAAAAGTTCAACCAGGTCACCTTCCTGCACGTCTACCACCACTGCACCATGT 33227108 Query 58497 TTACTTTAGGATGGGTAGGTATTAAATGGTTTGCAGGAGGTCAG 58540 | || | | ||| | || || || ||| | || ||||| ||| Sbjct 33227109 TCACGCTCTGGTGGATCGGCATCAAGTGGGTGGCCGGAGGACAG 33227152 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903410917684000