Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xiphophorus_20hellerii_20[genbank_20GCA_5F001443345.1_202015-11-13] 25 sequences; 733,802,474 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq6 102 7e-17 >seq6 Length=22489619 Score = 102 bits (112), Expect = 7e-17 Identities = 128/173 (74%), Gaps = 2/173 (1%) Strand=Plus/Plus Query 18964 TCCCCTTAATGGTACTACCTCCATGTCACACGTTATGTCAGTTTTACGT-TGCAAACGGT 19022 ||||| |||||| || || || || ||| | | |||||||| ||||| ||| | ||| Sbjct 14545691 TCCCCATAATGGCGCTGCCCCCCTGCCACGCCCTCTGTCAGTTCTACGTCTGCGA-CGGG 14545749 Query 19023 GAATTATCCTGCCAAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGTTCAAC 19082 || | ||||| || | |||||| | || | || ||||| || ||||| || |||||| Sbjct 14545750 GAGCTGTCCTGTCAGCTGTACCAGCGCTCCGCCGACATGGGTCTGGGGGTGCCTTTCAAC 14545809 Query 19083 ATTGCTGGATATGCACTTCTTACCTACATAGTAGCGCATGTTACAGGACTTAA 19135 || || | ||||||||||| |||||||| | || || |||||||||| || Sbjct 14545810 ATCGCCAGCTATGCACTTCTCACCTACATGATTGCACACATTACAGGACTCAA 14545862 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399503878276125