Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xiphophorus_20hellerii_20[genbank_20GCA_5F001443345.1_202015-11-13] 25 sequences; 733,802,474 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq6 158 1e-33 >seq6 Length=22489619 Score = 158 bits (174), Expect = 1e-33 Identities = 143/180 (79%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 145746 CTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAA 145805 || ||| || || | ||| || | ||||||||| || || | |||||||| |||||||| Sbjct 14545863 CTTGAGTCCTGTAATGTGTGCAATCATGTAGGTGAGAAGTGCATAGCTGGCGATGTTGAA 14545804 Query 145806 GGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCC 145865 ||||||||||| |||||||| | ||||||||||||||||| ||||| ||||||||| | Sbjct 14545803 AGGCACCCCCAGACCCATGTCGGCGGAGCGCTGGTACAGCTGACAGGACAGCTCCCCGTC 14545744 Query 145866 CGCCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGC 145925 ||||||||||| || ||| ||||||||| ||||| ||||| ||| ||||| || Sbjct 14545743 GCAGACGTAGAACTGACAGAGGGCGTGGCAGGGGGGCAGCGCCATTATGGGGAGGTCTGC 14545684 Score = 100 bits (110), Expect = 3e-16 Identities = 116/156 (74%), Gaps = 8/156 (5%) Strand=Plus/Minus Query 146034 GTCCACGTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCC 146093 |||| |||| | || |||||||||||||| ||||| || || || || ||||||||||| Sbjct 14544976 GTCCTTGTACTCTGCACCGAAGTGCCTCCATTGGAAACCATACACAGGTCCCAGGTCCCC 14544917 Query 146094 GGGCTCCCTGTGCCCCAGCCCGGCCCGGG----CGAGGAAGTCCCGGGACCCGTTGGCGT 146149 |||||| | | | |||| || | | |||||| |||||||||||||||| Sbjct 14544916 CTCCTCCCTCT----CTGTGAAGCCCAGGTTGTCCAAGAAGTCACGGGACCCGTTGGCGT 14544861 Query 146150 CCCAGATCTTGACGCCCCTCGCGGAGAGCTCATTGG 146185 |||||||||| || || || | || ||||| |||| Sbjct 14544860 CCCAGATCTTCACTCCTTTCTCTGACAGCTCTTTGG 14544825 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590076615601000