Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xiphophorus_20hellerii_20[genbank_20GCA_5F001443345.1_202015-11-13] 25 sequences; 733,802,474 total letters Query= NC_002185.1 Length=35466 Score E Sequences producing significant alignments: (Bits) Value seq18 149 1e-31 >seq18 Length=80077792 Score = 149 bits (164), Expect = 1e-31 Identities = 151/197 (77%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 5451 GCAGTAGCATCTTTCAGCCTTGCGGTTAACCGTAACTTTAAGGATGCTAATGGTGAGCGT 5510 ||||| || |||| | ||||| || ||||||| |||||| | ||||| || ||| Sbjct 59386089 GCAGTTGCGACTTTTACTCTTGCAGTAAACCGTACGTTTAAGAGTCAAAATGGCGAACGT 59386030 Query 5511 GAAGCAGACTTTATCAATTGCGTTATCTGGCGCCAGCAAGCTGAAAATTTGGCTAATTGG 5570 || || || ||||||||| ||| || ||||| || || ||||||||| | ||||| ||| Sbjct 59386029 GAGGCTGATTTTATCAATGTCGTGATGTGGCGTCAACAGGCTGAAAATCTTGCTAACTGG 59385970 Query 5571 GCTAAAAAAGGCGCATTAATTGGAATCACTGGACGTATTCAGACTCGTAGCTATGAAAAC 5630 |||||||||||| | | || || ||||| || ||||| ||||||||||| || || ||| Sbjct 59385969 GCTAAAAAAGGCTCTCTTATCGGGATCACAGGCCGTATCCAGACTCGTAGTTACGATAAC 59385910 Query 5631 CAACAGGGTCAACGAGT 5647 || || || ||||| || Sbjct 59385909 CAGCAAGGACAACGTGT 59385893 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 113369566343400