Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xiphophorus_20hellerii_20[genbank_20GCA_5F001443345.1_202015-11-13] 25 sequences; 733,802,474 total letters Query= NC_002703.1 Length=38347 Score E Sequences producing significant alignments: (Bits) Value seq18 105 2e-18 >seq18 Length=80077792 Score = 105 bits (116), Expect = 2e-18 Identities = 126/171 (74%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 6612 GCTGTAAATCGCCAGTTTAAAAATGCGAATGGCGAACGTGAGGCTGATTTAATTAACTGC 6671 || ||||| || |||||| | | ||||||||||||||||||||||| || || | Sbjct 59386068 GCAGTAAACCGTACGTTTAAGAGTCAAAATGGCGAACGTGAGGCTGATTTTATCAATGTC 59386009 Query 6672 GTTATTTGGCGACAACAAGCCGAAAATTTAGCTAAGTTTGCTAAAAAAGGAGCTTTGATT 6731 || || ||||| ||||| || |||||| | ||||| | ||||||||||| || | || Sbjct 59386008 GTGATGTGGCGTCAACAGGCTGAAAATCTTGCTAACTGGGCTAAAAAAGGCTCTCTTATC 59385949 Query 6732 GGAATAACTGGACGGATTCAAACAAGGAACTATGAGAACCAACAAGGACAA 6782 || || || || || || || || | | || || ||||| ||||||||| Sbjct 59385948 GGGATCACAGGCCGTATCCAGACTCGTAGTTACGATAACCAGCAAGGACAA 59385898 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 122588763606450