Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xiphophorus_20hellerii_20[genbank_20GCA_5F001443345.1_202015-11-13] 25 sequences; 733,802,474 total letters Query= NC_003157.5 Length=43106 Score E Sequences producing significant alignments: (Bits) Value seq18 145 2e-30 >seq18 Length=80077792 Score = 145 bits (160), Expect = 2e-30 Identities = 187/251 (75%), Gaps = 8/251 (3%) Strand=Plus/Minus Query 9687 GGTCGCATGACCAAGGACGCAGAGCTTCGCTATACAGCGAGTCAA--GTAGCTGTAGCTA 9744 || || |||||| ||||| ||| | || ||||| | |||| ||||| || || | Sbjct 59386137 GGGCGTATGACCCGTGACGCTGAGTTGCGTTATACCCCA--TCAAATGTAGCAGTTGCGA 59386080 Query 9745 CGTTCACACTTGCGGTAAACCGCAGATTTAAAGAG-CAAAACGGGGAGAGAGAAGCAGAT 9803 | || || ||||| |||||||| | ||||| ||| ||||| || || | || || ||| Sbjct 59386079 CTTTTACTCTTGCAGTAAACCGTACGTTTAA-GAGTCAAAATGGCGAACGTGAGGCTGAT 59386021 Query 9804 TTCATTAACTGT-GTTATCTGGCGACAGTCTGCTGAAAATTTAGCCAACTGGGCTAAAAA 9862 || || || ||| || || ||||| || ||||||||| | || |||||||||||||| Sbjct 59386020 TTTATCAA-TGTCGTGATGTGGCGTCAACAGGCTGAAAATCTTGCTAACTGGGCTAAAAA 59385962 Query 9863 AGGTGCTTTGATCGGAGTTACGGGTCGTATTCAGACACGTAACTACGAAAACCAACAAGG 9922 ||| || | ||||| | || || ||||| ||||| |||| ||||| ||||| ||||| Sbjct 59385961 AGGCTCTCTTATCGGGATCACAGGCCGTATCCAGACTCGTAGTTACGATAACCAGCAAGG 59385902 Query 9923 ACAACGTGTCT 9933 ||||||||||| Sbjct 59385901 ACAACGTGTCT 59385891 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 137817559085400