Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xiphophorus_20hellerii_20[genbank_20GCA_5F001443345.1_202015-11-13] 25 sequences; 733,802,474 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq16 98.7 1e-15 >seq16 Length=24388307 Score = 98.7 bits (108), Expect = 1e-15 Identities = 119/157 (76%), Gaps = 4/157 (3%) Strand=Plus/Minus Query 139610 TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 139669 ||||| |||||||| |||||| ||||||| | ||||| || ||||| ||||||||||| Sbjct 2613200 TCTTCCAGCTGTTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGAATGCCTTCTTTA 2613141 Query 139670 TCGGTGATTTTTTGTTTTAGCTGTTC-CACT-GTGTCGGTGGGCTCCACCTCAACGGTCA 139727 || ||| | |||| || | |||| || | || || ||||||||||||| | ||| | Sbjct 2613140 TC-CTGAATCTTTGCCTTCAC-GTTCTCAATGGTATCACTGGGCTCCACCTCCAGGGTGA 2613083 Query 139728 CCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||||| || || | ||||| ||||| || ||||| Sbjct 2613082 TGGTCTTCCCAGTGAGGGTTTTCACGAAAATCTGCAT 2613046 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496063844980000