Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xiphophorus_20hellerii_20[genbank_20GCA_5F001443345.1_202015-11-13] 25 sequences; 733,802,474 total letters Query= NC_004746.1 Length=36596 Score E Sequences producing significant alignments: (Bits) Value seq18 100 7e-17 >seq18 Length=80077792 Score = 100 bits (110), Expect = 7e-17 Identities = 119/160 (74%), Gaps = 1/160 (1%) Strand=Plus/Minus Query 7918 ACTATCATATCCACCCTTGATGAATTGGGGTACGATGCAGAATGGCAGATACTTAACAGC 7977 |||||| | || | | | ||||||| |||||||| |||||||| | || ||| Sbjct 66850135 ACTATC-TCTCTATCTTGGATGAATCAGGGTACGACCTTGAATGGCAAGTGCTCAACTCA 66850077 Query 7978 AAAAATTTCGGAGTTCCACAAAACCGAGAGAGGGTGTTCATTATCGGACATCTTAGAGGA 8037 ||| ||| |||||| |||||||| |||| | | | | |||||||||||||||| || Sbjct 66850076 AAAGATTACGGAGTACCACAAAATAGAGAACGCATCTATACTATCGGACATCTTAGAAGA 66850017 Query 8038 GAACGTGGACGAGAAGTATTTCCTATCACCAGAGAAAGCA 8077 || || ||||| ||||| | ||| ||| ||||||||||| Sbjct 66850016 AAAGGTCGACGAAAAGTACTACCTCTCAGCAGAGAAAGCA 66849977 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 116985565269900