Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xiphophorus_20hellerii_20[genbank_20GCA_5F001443345.1_202015-11-13] 25 sequences; 733,802,474 total letters Query= NC_005262.3 Length=63882 Score E Sequences producing significant alignments: (Bits) Value seq18 131 7e-26 >seq18 Length=80077792 Score = 131 bits (144), Expect = 7e-26 Identities = 279/414 (67%), Gaps = 2/414 (0%) Strand=Plus/Plus Query 13541 TACGGAAGCGTGTGCAGCGGCATCGAGGCCGCGACCGTTGCTTGGCATCCGCTCGGCTGG 13600 || || ||||| |||||||| |||||||| | ||||||| ||||| | || | Sbjct 63182397 TATGGCAGCGTTTGCAGCGGAATCGAGGCGGTATCCGTTGCGTGGCAGGGCATGGGATTT 63182456 Query 13601 AAGCCGGCGTGGTTCGCTGAGATCGAGAAATTCCCTAGCGCCGTGCTGGCGCATCATTAC 13660 | ||||| |||||| | || || ||| |||||| | || || | |||||||||||| Sbjct 63182457 GAACCGGCATGGTTCTCGGAAATAGAGCCATTCCCATGTGCGGTATTAGCGCATCATTAC 63182516 Query 13661 CCCGATGTTCCTAACCTTGGAGACATGACGAAGATCACGCGCGCGG-TGCTGGCGCGTGA 13719 || | | || || | || |||||||||| | | || | |||| | | || | || Sbjct 63182517 CCGACTATCCCAAATCACGGCGACATGACGACG-TTACCGGAGCGGATTTTATCGGGGGA 63182575 Query 13720 GGTCGAAGTGCCTGACGTGCTGGTCGGTGGCACGCCGTGCCAGGCATTCAGCCTCGCGGG 13779 | |||| ||||| | |||||||||| |||||||||||||| || | || || Sbjct 63182576 AATTGAAGCCCCTGATATTTTGGTCGGTGGTACGCCGTGCCAGGCTTTTTCTGTTGCTGG 63182635 Query 13780 TCTGCGTGAATCCCTCTCGGATGAGCGCGGGAATCTTACTTTGAAATTCGTTGAGTTGAT 13839 || | | ||| ||||| ||||| ||||| || | || || | | | Sbjct 63182636 GCTAAGAAACAGCCTAAATGATGAACGCGGAAATCTGACGCTTGTTTTTGTAAGGATTTT 63182695 Query 13840 CGATGCAATTGACCATGTTCGGCGACTCGATGGCGCAGCACCGGCCGTCGTCGTCTGGGA 13899 |||||||| || | |||| |||| | | || || || ||||| | ||||| Sbjct 63182696 AAATGCAATTAACACTATTCGACGACGCCACGGACTGCCAGACGCAATCGTCCTATGGGA 63182755 Query 13900 AAACGTCCCCGGCGTCCTCTCGACAAAAGACAATGCGTTCGGGTGCTTTCTGGC 13953 |||||||||||||||| | || ||| |||||| || ||||| || ||| |||| Sbjct 63182756 AAACGTCCCCGGCGTCTTATCAACACGAGACAACGCCTTCGGATGTTTTTTGGC 63182809 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 204297537753075