Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xiphophorus_20hellerii_20[genbank_20GCA_5F001443345.1_202015-11-13] 25 sequences; 733,802,474 total letters Query= NC_005294.1 Length=42935 Score E Sequences producing significant alignments: (Bits) Value seq18 1608 0.0 >seq18 Length=80077792 Score = 1608 bits (1782), Expect = 0.0 Identities = 1178/1365 (86%), Gaps = 12/1365 (1%) Strand=Plus/Minus Query 6968 CTAACCAACCTAATAATATCCAACCTGATATAACCA--ACCTTACTGAACCAGATGGTGC 7025 ||||||| |||||| | ||| || || || || || || ||||||||| |||| Sbjct 30110975 CTAACCAGACTAATATAAACCAGACTAATTTAGACAGAACATT--TGAACCAGAGGGTGT 30110918 Query 7026 TGGTGGTAACTCTTTATATAGTATAGAGGACGCCCCAGCAGAAAACGACCTTGGTATTGT 7085 ||||| ||| || ||||||||||||||||||| ||| | ||||||| | || ||||| Sbjct 30110917 TGGTGCTAATACTCTATATAGTATAGAGGACGCACCACCCAAAAACGATTTGGGAATTGT 30110858 Query 7086 TCACGATTGGATTTTTTCAGAGTTTGGCAGATACCCAACGCCGTTTGAGATTGAGGACTT 7145 ||||||||||||||||||||||||||| |||| || || |||||||| || |||||||| Sbjct 30110857 TCACGATTGGATTTTTTCAGAGTTTGGTCGATATCCGACACCGTTTGAAATCGAGGACTT 30110798 Query 7146 GAAATATTTCTTACAAGACCATAGTAAAGAGGTTATCAAGTTAGCAATCAAGGAATGCGT 7205 ||| | ||||| ||||||||||||||||||||||| |||||||| ||||||||||| || Sbjct 30110797 GAAGTCATTCTTGCAAGACCATAGTAAAGAGGTTATTAAGTTAGCCATCAAGGAATGTGT 30110738 Query 7206 TGGAAATGGTAAACCTTACTTCAAATACCTTGCAAGCATTTTGAGAGACTGGAAACAGAA 7265 ||| || ||||| ||||| ||||| || || || || ||||| || ||||| ||||| Sbjct 30110737 TGGTAACGGTAAGCCTTATTTCAAGTATCTCAGTAGTATCTTGAGGGATTGGAAGCAGAA 30110678 Query 7266 AGGTTTAACGACTGTTGAACTAGTTGAGAATAGACAGAGACCGAAGAAACAACCTGCTTA 7325 ||| | || | ||| |||| || ||||| |||| || |||||| | |||| ||| Sbjct 30110677 AGGGCTGGTCACAGCTGAGTTAGTCGAAAATAGGCAGAAGCCAAAGAAAGAGCCTGTTTA 30110618 Query 7326 TTCTGGTAGTGCTAGGGAAGTGCGTCAGGAATATCATGGCGAGTTGCCATTCTAGGAGGG 7385 |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 30110617 TTCTGGTAGTGCTAGGTCAGTGCGTCAGGAATATCATGGCGAGTTGCCATTCTAGGAGGG 30110558 Query 7386 GATAAGATGCAGAGATTAGGATTTGAACCGCTCCATTATGTAAATGAGAAAGAGATTTGC 7445 |||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| Sbjct 30110557 -ATAAGATGCAGAGATTAGGATTTGAACCGCTCCATTATGTGAATGAAAAAGAGATTTGC 30110499 Query 7446 CAAAAGCATTCCTGCTTCATGTGGACGTTTAAAGAACCAGTTCGGGCTACTAATCGAAAA 7505 |||||||||||||| ||||||||||| |||||| | |||||| ||||||| ||||| ||| Sbjct 30110498 CAAAAGCATTCCTGTTTCATGTGGACTTTTAAACAGCCAGTTAGGGCTACCAATCGCAAA 30110439 Query 7506 GAACCGTATCAGCCCACGTTTTGCCCTGAGTGCAAGCGTGAAGACATGGAACGAGAGCAA 7565 ||||| |||||||| ||||||||||||||||||||||||||||| ||||||||||| ||| Sbjct 30110438 GAACCATATCAGCCTACGTTTTGCCCTGAGTGCAAGCGTGAAGATATGGAACGAGAACAA 30110379 Query 7566 CTGCAAATGGTCGGAAAGGCTTATATCTCGTCTATCTTGAGTAACACGTTTGAAGTGTTA 7625 ||||||| |||||| ||||||||||||| ||||| |||||||||||||||||||||||| Sbjct 30110378 CTGCAAAAAGTCGGACAGGCTTATATCTCATCTATTTTGAGTAACACGTTTGAAGTGTTA 30110319 Query 7626 GCTAGAAACAGCTTAATGCCAAGTGATATGAAAGACGCTAGTTTCAGTACGTTCACTGTA 7685 ||||||||||||||||||||||| || |||||||| |||||||| | ||| ||||| || Sbjct 30110318 GCTAGAAACAGCTTAATGCCAAGCGACATGAAAGAAGCTAGTTTTAATACATTCACGGTC 30110259 Query 7686 TCGAATGAGACAGATGAACAGGCTAAGAATTTTGCTCTGAGAGTAGTAAGGCATTACTTC 7745 ||||||| || || | || || || | ||| ||||||| | ||||||||||||| Sbjct 30110258 AATAATGAGATTGACGAGAAAGCGAAAAACTACGCTTTGAGAGTGGCAAGGCATTACTTC 30110199 Query 7746 AACGATGGACGAGGGAATGCAGTGATTGTTGGACAAGCTGGCAGAGGTAAGACACATTTA 7805 || ||||| ||||||||||||||||||||||||||||| || |||||||||||||||||| Sbjct 30110198 AATGATGGGCGAGGGAATGCAGTGATTGTTGGACAAGCAGGAAGAGGTAAGACACATTTA 30110139 Query 7806 GCGATTGCGATTGCTAAGAAGTTGAATATAGATTTCAAGGCTAATAACAATCCCAAGAGT 7865 || ||||||||||||||||||||||||||||| || ||||||||||||||||| |||||| Sbjct 30110138 GCTATTGCGATTGCTAAGAAGTTGAATATAGACTTTAAGGCTAATAACAATCCAAAGAGT 30110079 Query 7866 GTGTTATTCATGAATGTTCCTGCTATGTTCCAAAAAATCCAGAGTGGATTTAATAAAAAG 7925 ||| |||| |||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct 30110078 GTGCTATTTATGAATGTTCCTTCTATGTTTCAAAAAATCCAGAGTGGATTTAATAAAAAG 30110019 Query 7926 GACGCTCGGACAACTGACGAATGGCTTGACCTACTaaaaaaaGTCGACTACTTGATACTA 7985 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 30110018 GACGCTCGGACAACTGACGAATGGCTTGACCTACTAAAAAAAGTCGACTACTTGATACTA 30109959 Query 7986 GACGACTTTGGGAAAGGCGATCAGTCACAATGGAAACAGGACTTTCTCTATAACTTGCTT 8045 ||||||||||||||||| || |||||||| ||||| |||||||||||||||||||||||| Sbjct 30109958 GACGACTTTGGGAAAGGTGACCAGTCACAGTGGAAGCAGGACTTTCTCTATAACTTGCTT 30109899 Query 8046 GATTCAAGGGATAAGACGATTGTTACAACTAATTTGATTGGTAAGGACATGGTTCAGATA 8105 ||||||||||||||||||||||| ||||||||||||||||| ||||||||| || ||||| Sbjct 30109898 GATTCAAGGGATAAGACGATTGTCACAACTAATTTGATTGGCAAGGACATGATTAAGATA 30109839 Query 8106 TTTGATGCAAGTCTGGTTAGTCGAGTAGCCAAAGGTGCGAAAGAAATGACTTTCAAATAT 8165 |||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| Sbjct 30109838 TTTGATGCAAGTCTCGTTAGTCGAGTAGCTAAAGGTGCGAAAGAAATGACTTTCAAATAT 30109779 Query 8166 CCTGACAGTGCAGAAGATAGGAGGACATTACCATTTTGATGAAACAACAAA--CAAGACA 8223 ||||||| ||||||||| |||||||||||||| ||||| |||||| | |||| | Sbjct 30109778 CCTGACAATGCAGAAGACAGGAGGACATTACCGTTTTG-----ACAACAGAGGAAAGAAA 30109724 Query 8224 AGAACAAATAGAGGATTTTGAAGAAAAACATTATGGACTATCTAGCTTGCTGAAAGAACG 8283 | | | |||||||||||||| | | || ||| |||||| | | ||||||| || Sbjct 30109723 AAAGCTGATAGAGGATTTTGAGACAGACCACTATCAACTATCAACACTATTGAAAGACCG 30109664 Query 8284 GTTGCTGATTACAAGCGACTACCAGTTTACTAGAAAGATGAACGA 8328 |||||||||||| | ||| | | ||| |||| ||||||||||| Sbjct 30109663 GTTGCTGATTACGACAGACGAGCGGTTCACTAATAAGATGAACGA 30109619 Score = 352 bits (390), Expect = 8e-93 Identities = 772/1140 (68%), Gaps = 66/1140 (6%) Strand=Plus/Minus Query 41549 AGTAAT-ATGGATATCGATACAAGCAGACTACGCACGGACTTGCCTCAAGTAGGAGTGCA 41607 |||||| |||||||| || |||||||||||| | || ||| | || || || |||| || Sbjct 30081545 AGTAATCATGGATATTGACACAAGCAGACTAAGGACTGACCTTCCCCAGGTTGGAGAACA 30081486 Query 41608 ACCTTATAGACAAGTACACGCTCACTCAACTGGAAACCGTAACTCAACTGCTCAAAACGA 41667 ||| || |||||| | || || |||||||| ||||| | || ||||| |||||||| || Sbjct 30081485 ACCATACAGACAAATTCATGCGCACTCAACAGGAAATCCAAATTCAACCGCTCAAAATGA 30081426 Query 41668 GGCGGATTATCACTGGAGAAAGGACCC--TGAACTTGGGTTCTTTTCTCATGTGGTCGGA 41725 ||||| || ||| | || |||| ||| || || || || || || ||||| Sbjct 30081425 AGCGGACTACCACATGCGAC--GACCTGTTGATTCAGGATTTTTCTCGCACGTTGTCGGG 30081368 Query 41726 AATGGCCGAGTTATGCAGGTAGGCCCTGTAAACA---ACGGGAG-TTGGGACGTTGGGGG 41781 ||||| || || ||||| || ||| ||| | ||||| || || || || || Sbjct 30081367 AATGGTCGTGTGATGCAAA----CCTGGTACACAGACATGGGAGCTTATGATGTAGGCGG 30081312 Query 41782 CGGTTGGAATGCTGAGACCTATGCAGCAGTTGAATTGATTGAAAGCCATTCAACTGAAGA 41841 |||||||| | ||| || | ||||||||||||||| |||||| || | || Sbjct 30081311 TGGTTGGAACGTTGAAGGATACGGTCAAGTTGAATTGATTGAGAGCCATGAGACCAAGGA 30081252 Query 41842 AGAGTTCATGGAAGACTACCGCCTCTATATCGAATTGCTACGTAATCTAGCAGATGAAGC 41901 |||||||||| || || |||||| | || | | || || || || |||||||| Sbjct 30081251 AGAGTTCATGCGTGATTATAAGCTCTATGTTGAGCTTTTGCGCAACCTCGCTGATGAAGC 30081192 Query 41902 AGACCTACCAAAAACTCTTGATACTGACGACTTGGCAGGTATCAAAACACATGAATACTG 41961 || | || ||||| || || ||||| | | ||||| ||||| || ||| |||| || Sbjct 30081191 AGGGATTCCTAAAACGCTGGACTCTGACAGCCTAGCAGGAATCAAGACGCATCAATATTG 30081132 Query 41962 TACCAATAACCAGCCTAACAACAACTCAGACCACGTTGACCCTTATCCATATCTTGCCAA 42021 || ||||||| ||| ||| |||| ||||||||||| || ||||| |||||||| || Sbjct 30081131 CACATATAACCAACCTCGAAACTACTCTGACCACGTTGATCCGTATCCTTATCTTGCAAA 30081072 Query 42022 ATGGGGCGTTAGCCGTGAACAGTTCAAGCAGGATATTGAAAACGGCTTGACAATTGAAGC 42081 ||||||| | |||||||| ||||| || | ||||||||| || | | | |||||| Sbjct 30081071 ATGGGGCATCAGCCGTGAGCAGTTTAAAAATGATATTGAAGGTGGTATCTCTACTGAAGC 30081012 Query 42082 AGGCTGGAAGAAAAACGATACAGGCACCTGGTACGTGTACTCAGACGGCTCTTATCCAAA 42141 || ||| |||| | || ||| |||| | | | ||||| ||||||||||| | Sbjct 30081011 TGGATGGCGTCAAAATGCCACTGGCTGGTGGTGGGAGGAGTCAGATGGCTCTTATCCTAC 30080952 Query 42142 AGATAAGTTTGAAA-AGGTCAACGGAAC--CTGGTATTACTTCGACGGGTCAGGCTATAT 42198 | | | | |||| | ||||| ||| |||| ||||| || | |||||| | Sbjct 30080951 A-AACCGCTGGAAACAAATCAAC--AACGAATGGTTCTACTTTGATGAACATGGCTAT-T 30080896 Query 42199 GCTT-GCAGACCGCTGGAAGAAGCACTCAGACGGCA---ATTGGTACTGGTTTGATCAAT 42254 |||| |||| ||| || || || | | |||| || |||| ||| Sbjct 30080895 GCTTAATTAACCGTTGGTTTAA------TGATGGTAAAGACTGGTTCTATCTTGA-CAAG 30080843 Query 42255 C-AGGCGAAATGGCCACAGGCTGGAAGAAAATCGCTGAGAAGTGGTACTATTTCGACGTA 42313 | |||| ||||| ||||||||||| | || | ||||| | ||| | | Sbjct 30080842 CGTGGCGCAATGGTCACAGGCTGGATGTTCCTCAACCATCGCTGGTATTTCTTCAAATCA 30080783 Query 42314 GAGGGTGCTATGAAGACAGGATGGGTCAAGTATAAAGACACTTGGTACTACCTAGACAGC 42373 || || ||| || || ||||| || ||| || | ||||| | | | || Sbjct 30080782 GATGGCCGCATGGCTACTGGCTGGGTTAAATATCGTGAAATCTGGTATTTCATGGAAGAA 30080723 Query 42374 AAAGACGGTAACATGGTATCAAATGAATTCATCAGAGCAGGTCAAGGCTGGTACTACATT 42433 |||||||| | ||| |||| || ||||| ||| | ||||| | || ||||| ||| | Sbjct 30080722 AAAGACGGATATATGTTATCTAAACAATTCGTCAAATCAGGTGACGGATGGTATTACTTG 30080663 Query 42434 AAACCAGACGGAACAATGGCTGATA-AGCTAGAGTTCACGGTAGAACCAGACGG-CTTGA 42491 || || |||| || | | | | | || |||| ||||||| | || |||| Sbjct 30080662 AAGGCAAACGG-TGAACTTCACACAGATCCAGCATTCAAAACAGAACCAAATGGTCTTG- 30080605 Query 42492 TTAC-------GAC---------------------AAAATAGAAAGACTTCAAAATAGAT 42523 | || ||| |||| |||||| ||| |||||||| Sbjct 30080604 TGACTGTAGTTGACAAACTAAAAGAAGAAAAATAAAAAACAGAAAGGCTTTCAAATAGAT 30080545 Query 42524 TACACTAACCGCCAGCAATAGCTTGCGtttttttCGTTTG--TCTAGAATTGACTTGTTG 42581 |||||||||||| || ||||||| |||||| ||||| | | ||||||||||||| Sbjct 30080544 TACACTAACCGCAGGCTCAGGCTTGCGGTTTTTTTGTTTGCTTTGAAAATTGACTTGTTG 30080485 Query 42582 ACATCAACAAATAGCTTTATAAAGCGCTTGGTTGCCAATTTTGTTGACGTTAACAAAATT 42641 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 30080484 ATGTCAACAAATAGCTTTATAAAGCGCTTGGTTGCCAATTTTGTTGACGTTAACAAAATT 30080425 Score = 277 bits (306), Expect = 5e-70 Identities = 218/261 (84%), Gaps = 0/261 (0%) Strand=Plus/Minus Query 14191 TGAAACGATTCATAGCTATCTGGATTCTTGTCTCTGCTGGACTAAACATCTGGCAGATGG 14250 ||||||||||||| || || |||||| | | ||||||||| | || ||||||||||||| Sbjct 30103613 TGAAACGATTCATCGCAATATGGATTTTGCTATCTGCTGGATTGAATATCTGGCAGATGG 30103554 Query 14251 ACAGGATTCGAGATTTGGAAGAGAAGAAGCCTATGGTTATCTACAAGGCTGATAATGTAG 14310 | | || | || || ||| |||||||| ||||||||||| || || ||||| | || Sbjct 30103553 ATAAAATCAGGGAATTAGAAAGTAAGAAGCCGATGGTTATCTATAAAGCGGATAACGCAG 30103494 Query 14311 GAGCTGAGATTTTCGGTAAAGTCGTCGAGAAAGGACGGCATGGCAAGCTATACACGCTTA 14370 | ||||| || |||||||| ||||||||||||||||| || |||||||||||||| |||| Sbjct 30103493 GTGCTGATATATTCGGTAAGGTCGTCGAGAAAGGACGACACGGCAAGCTATACACTCTTA 30103434 Query 14371 CCATTCGTGACTACGGTGTGTTCGTGGTTACGAAGGACGTGTATGAGAAAGTGAAAGTTG 14430 | |||||||| ||||| ||||||||||||||||||||||||||||| || |||||||||| Sbjct 30103433 CTATTCGTGATTACGGGGTGTTCGTGGTTACGAAGGACGTGTATGACAAGGTGAAAGTTG 30103374 Query 14431 GGGATGAGGTAAGAATATGAA 14451 | |||||||| || || |||| Sbjct 30103373 GAGATGAGGTGAGGATTTGAA 30103353 Score = 259 bits (286), Expect = 1e-64 Identities = 229/286 (80%), Gaps = 0/286 (0%) Strand=Plus/Minus Query 9803 ATGTTTGATTATGACAGAGATATAATGCAACCGCCTGAAGAACGTGAAGAACTTGATCCA 9862 ||||||||||| ||||||||||| ||||||||||||||| | ||||||| || ||| Sbjct 30108364 ATGTTTGATTACGACAGAGATATGATGCAACCGCCTGAATCCAGGGAAGAACGCGACCCA 30108305 Query 9863 AGCGAGTACATCTATGTTGGATGTGGGCAGTATCGATACGTGGGTGATGAAGTATGATTC 9922 |||||||| | ||| ||||||| || ||||||||||| || ||||||||| ||||||| Sbjct 30108304 AGCGAGTATGTGTATATTGGATGCGGTCAGTATCGATATGTAGGTGATGAAATATGATTG 30108245 Query 9923 AGGAGCTACTTGCAGAAATCGACAACTGGCGAGCTGAGTATATGCATCTTGGCCGAGAAC 9982 | || ||| ||||||||| | ||||| ||| ||||| |||||||| | | | | Sbjct 30108244 AAGAATTACACGCAGAAATCAGGCAGTGGCGTTTTGACTATATCCATCTTGGTCAATAGC 30108185 Query 9983 TCGGAGAAATCATCAACGACCAACAGGATATTATTTTAAAATTGCAAAACGAAAATCGGC 10042 | |||||||||||| || | ||||| || |||||||| ||| | ||||||||||| | | Sbjct 30108184 TAGGAGAAATCATCGACAAGCAACAAGACATTATTTTGAAAATACAAAACGAAAACAGAC 30108125 Query 10043 GTATAAAGCGTGAAAATTGGAATTTGAAGAAGACGAAAGGAAGAAG 10088 | | ||||||||||||||||| | |||||||||||||||||||| Sbjct 30108124 GCTTGAAGCGTGAAAATTGGAACCTTAAGAAGACGAAAGGAAGAAG 30108079 Score = 244 bits (270), Expect = 3e-60 Identities = 219/272 (81%), Gaps = 2/272 (1%) Strand=Plus/Minus Query 23976 AAGCACCTAGAGGGATCTAAGTGCTTTTTT-CGTACTCAGAAAGGATTGA-AAATGGATA 24033 |||||||||||| |||||||||||||||| ||| ||||||||||| | | ||||| ||| Sbjct 30095548 AAGCACCTAGAGAAATCTAAGTGCTTTTTTTCGTGCTCAGAAAGGAGTAATAAATGAATA 30095489 Query 24034 CAGTGAGAATTGGGATACCTAACGTAGAATTTTTAGGATCAAGCGAAAATGACTCAGCGA 24093 ||| |||||| | ||| ||| ||||||||| | |||| | |||| | || | | | Sbjct 30095488 CAGCAAGAATTCGAATAACTACCGTAGAATTCTCAGGAAAAGGCGACATCGAAACCCCAA 30095429 Query 24094 CAGTGAAATTAGAGTTAAATATCCATGGGACGGATACGTTAAGTGTGATTGAGTTACTAC 24153 | || |||||||| |||| ||| ||||| |||| ||| || || ||||||||||||| Sbjct 30095428 CTGTTAAATTAGAATTAAGTATTCATGGAACGGGTACCTTTTCTGCCATTGAGTTACTAC 30095369 Query 24154 CTAAAATATTAAAAGACATTTCTTCATTATCGTATGAAGTTGATTGATTGTAACATTAAA 24213 |||||||||||| |||||||||||||||||||||||||| |||| ||| |||| | || Sbjct 30095368 CTAAAATATTAACCGACATTTCTTCATTATCGTATGAAGTCGATTAATTATAACTTAGAA 30095309 Query 24214 AGGAGTAAAGACATGTTTATATGGGATTGGGT 24245 ||| || || |||||||||| ||||| ||||| Sbjct 30095308 AGGGGTGAAAACATGTTTATTTGGGACTGGGT 30095277 Score = 192 bits (212), Expect = 2e-44 Identities = 411/604 (68%), Gaps = 15/604 (2%) Strand=Plus/Plus Query 41545 GAGGAGTAAT-ATGGATATCGATACAAGCAGACTACGCACGGACTTGCCTCAAGTAGGAG 41603 ||||| |||| ||||| | |||| ||| ||| |||| || | | |||||| | || | Sbjct 50176777 GAGGA-TAATCATGGAAGTTGATAAAAGTAGATTACGAACAAATCTTCCTCAAATCGGTG 50176835 Query 41604 TGCAACCTTATAGACAAGTACACGCTCACTCAACTGGAAACCGTAACTCAACTGCTCAAA 41663 |||||| ||| ||||||| || ||||||||||| ||||| | |||||| || || |||| Sbjct 50176836 AGCAACCCTATCGACAAGTTCATGCTCACTCAACAGGAAATCCTAACTCTACGGCACAAA 50176895 Query 41664 ACGAGGCGGATTATCACTGGAGAAAGGACCC--TGAACTTGGGTTCTTTTCTCATGTGGT 41721 | || || ||||| || | | | || ||| || || || || |||||||| Sbjct 50176896 ATGAAGCAGATTACCATATGCGTC--GTCCAGTTGAGTCAGGATTTTTCTCCCATGTGGT 50176953 Query 41722 CGGAAATGGCCGAGTTATGCAGGTAGGCCCTGTAAACAACGGGAGTTGGGACGTTGGGGG 41781 || ||||| || | ||||| | ||| || || || || ||||| || Sbjct 50176954 AGGGAATGGTCGTATCATGCAAACTTGGTTAGTAGACCGAGGTGCTTATGATGTTGGCGG 50177013 Query 41782 CGGTTGGAATGCTGAGACCTATGCAGCAGTTGAATTGATTGAAAGCCATTCAACTGAAGA 41841 ||| ||||||| ||| || || ||||||| | || ||||| ||| | || |||| Sbjct 50177014 CGGATGGAATGTTGAAGGTTACGCTCAAGTTGAACTAATAGAAAGTCATGAATCTAAAGA 50177073 Query 41842 AGAGTTCATGGAAGACTACCGCCTCTATATCGAATTGCTACGTAATCTAGCAGATGAAGC 41901 ||| |||||| ||| || || || ||| || | | ||||| | |||| || || || Sbjct 50177074 AGAATTCATGAGAGATTATCGACTTTATGTCAAGCTATTACGTGAGTTAGCTGACGAGGC 50177133 Query 41902 AGACCTACCAAAAACTCTTGATACT-GACGACTTGGCAGGTATCAAAACACATGAATACT 41960 | | || |||||||| ||| || | | |||| | || || ||||| ||| ||| | Sbjct 50177134 TGGAATCCCTAAAACTCTAGATTCTAGTAGTCTTG-CTGGGATTAAAACTCATCAATTTT 50177192 Query 41961 GTACCAATAACCAGCCTAACAAC--AACTCAGACCACGTTGACCCTTATCCATATCTTGC 42018 |||| | ||||| || || || || | || || || || || |||||||| ||||| Sbjct 50177193 GTACTTACAACCAACCAAATAATGGAAGT--GATCATGTAGATCCCTATCCATACCTTGC 50177250 Query 42019 CAAATGGGGCGTTAGCCGTGAACAGTTCAAGCAGGATATTGAAAACGGCTTGACAATTGA 42078 ||||||||| |||| | |||||||| ||| | ||||||||| || | || ||| Sbjct 50177251 AAAATGGGGCATTAGTAGAGAACAGTTTAAGAAAGATATTGAATCTGGTCTAAC---TGA 50177307 Query 42079 AGCAGGCTGGAAGAAAAACGATACAGGCACCTGGTACGTGTACTCAGACGGCTCTTATCC 42138 || | |||||| |||||| || |||| | | ||| ||||||||||| Sbjct 50177308 AGGAAACTGGAAACGAAACGAAGTTGGTTGGTGGTGGGAAGAAGCAGGTGGCTCTTATCC 50177367 Query 42139 AAAA 42142 |||| Sbjct 50177368 AAAA 50177371 Score = 159 bits (176), Expect = 1e-34 Identities = 157/203 (77%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 16045 GACAACATAAACAAACCAAGCCACTACCAAGGTTCAAATGGCCTTGAGGCTATCGATGTT 16104 |||||| |||||||||||||||| || ||||| ||||| || ||||| ||| || || Sbjct 30101680 GACAACGTAAACAAACCAAGCCATTATCAAGGATCAAAAGGTCTTGAAAGTATTGAAGTG 30101621 Query 16105 GTGCATAACTTCGTTGGGAGCCTTTCCGGAGCGTCTGCTTTCTTTTGGGGCAACGCAATC 16164 | | ||||| |||| | || | || | | || | | ||||||||||||||| Sbjct 30101620 ATTGACAACTTTATTGGCAATCTGCCAGGGAAGGCAGCGTGGTGCTGGGGCAACGCAATC 30101561 Query 16165 AAGTATATGTTACGGTTTCAAAAGAAAAACGGTCTTGAAGACTTGAAGAAAGCCAGAAAG 16224 ||||||||| | || || ||||||||||| |||||||| ||| |||||||||| | ||| Sbjct 30101560 AAGTATATGCTTCGTTTCCAAAAGAAAAATGGTCTTGAGGACCTGAAGAAAGCACGCAAG 30101501 Query 16225 AATCTTGACTGGTTGATTGAGGA 16247 || ||||| |||||||||||||| Sbjct 30101500 AACCTTGATTGGTTGATTGAGGA 30101478 Score = 125 bits (138), Expect = 2e-24 Identities = 100/118 (85%), Gaps = 8/118 (7%) Strand=Plus/Minus Query 11969 AAAACTGCGAACTAGAAAACATCAGTAAAGGTCATGTGATCTTGGACGAGCGACTGCCCG 12028 |||| |||||||||||| | ||||||||||| |||||| |||||||||||||||||||| Sbjct 30106270 AAAAAAGCGAACTAGAAAGCGTCAGTAAAGGTTATGTGACCTTGGACGAGCGACTGCCCG 30106211 Query 12029 TATTTAGCCAATTCTCACAA------AGGCAGTCGCAttttttt-GGAGAAAATTAAT 12079 ||||||||||| ||||||| |||||||||||||||||| || |||||||| Sbjct 30106210 TATTTAGCCAA-ACTCACAACAACAGAGGCAGTCGCATTTTTTTATGATGAAATTAAT 30106154 Score = 105 bits (116), Expect = 2e-18 Identities = 75/85 (88%), Gaps = 1/85 (1%) Strand=Plus/Minus Query 8895 AAGATAAAACAAAAAGCACCTGACGGCAATCAGGCGCATACTAAAATTACTAATTGAATT 8954 || |||||| ||||||||||||||||||||||||||||| ||||| ||||| | |||| Sbjct 30109582 AACATAAAAATAAAAGCACCTGACGGCAATCAGGCGCATATCAAAATAACTAACTAAATT 30109523 Query 8955 ATAACAC-GAAAGAGAGGAAATTGC 8978 ||||||| |||||||||||||| || Sbjct 30109522 ATAACACAGAAAGAGAGGAAATAGC 30109498 Score = 95.1 bits (104), Expect = 3e-15 Identities = 102/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 16524 CTAGATACGACAACAGCAGGTCGGCGTTTCCGAATTTCACGTCCAGCAGATGGTTCAAAA 16583 ||||| ||||| | ||||||||| |||||| | ||||| || || | ||||| ||||| Sbjct 72131629 CTAGAAACGACCAAAGCAGGTCGCCGTTTCTGGATTTCTCGACCGACTGATGGATCAAAG 72131570 Query 16584 TCAATCCAAATGATATCTTGCTGTTTGGGTATGTAATTAGTATTCATTATCAAGTAATAC 16643 || | |||||||||||| |||| || || || || | || ||| |||||||| | | Sbjct 72131569 TCCAGCCAAATGATATCCTGCTTTTCAGGAATATAGTCAGATTTCGCTATCAAGTGACCC 72131510 Query 16644 AACTCCTTCGAAATC 16658 || ||||| ||||| Sbjct 72131509 TACCCCTTCAAAATC 72131495 Score = 87.8 bits (96), Expect = 5e-13 Identities = 99/132 (75%), Gaps = 2/132 (2%) Strand=Plus/Minus Query 16768 ATTCCTAAGTTTTTCGGAATGGTCACAGTGACAGAGTTCCCAACCTTACGAGTTTTAACA 16827 || ||||| ||||| |||||||||||||||| |||||| || ||||| ||||| || || Sbjct 72131286 ATACCTAAATTTTTAGGAATGGTCACAGTGAGAGAGTTTCCCACCTTTCGAGTCTTTACT 72131227 Query 16828 GTATTCATT--TGTTTCTCCTTTGTTTCGTATACATACAGTATACACCTAAAAACGGAGC 16885 ||||||||| | | |||| || ||||||| |||||| ||| ||||| | Sbjct 72131226 GTATTCATTGCTCTACCTCCACGAATTAGTATACACTAAGTATATACCCGAAAACAAAAA 72131167 Query 16886 AAGGCAAGAAAA 16897 ||| |||| ||| Sbjct 72131166 AAGTCAAGTAAA 72131155 Score = 82.4 bits (90), Expect = 2e-11 Identities = 51/55 (93%), Gaps = 0/55 (0%) Strand=Plus/Minus Query 6100 ATAAGATTTCTCCAATCGTTTTATTTTGATTATACCACATTTGAAAGGTGGTTAG 6154 |||||||||||||||| |||||||||||||||||||| |||||||||| ||| || Sbjct 30113576 ATAAGATTTCTCCAATTGTTTTATTTTGATTATACCATATTTGAAAGGGGGTGAG 30113522 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 137270359247850