Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xiphophorus_20hellerii_20[genbank_20GCA_5F001443345.1_202015-11-13] 25 sequences; 733,802,474 total letters Query= NC_006552.1 Length=65195 Score E Sequences producing significant alignments: (Bits) Value seq18 87.8 7e-13 >seq18 Length=80077792 Score = 87.8 bits (96), Expect = 7e-13 Identities = 110/149 (74%), Gaps = 3/149 (2%) Strand=Plus/Plus Query 11263 GCCTTCGATGTAGACCTGGGAGCCCTTTCGCAGGTATTGCGCTGCGATTTCGGCCAGCCG 11322 |||||| | || || ||| ||| ||| |||||||||| | ||||||||||| || || Sbjct 61543070 GCCTTCCAAATACACTTGGCTGCCTTTTTTCAGGTATTGCCCAGCGATTTCGGCGAGGCG 61543129 Query 11323 GCCAAAGAGCACGACCCGGTGCCACTCGGTGCGCTCCTGCTGCTGGCCGGTCTGCTTGTC 11382 || | | || |||||||||||||||||| ||| |||| ||| ||| ||| Sbjct 61543130 GCGGTACATGGTGATGTTGTGCCACTCGGTGCGCTCTTGCCGCTGTCCG--TTGC-GGTC 61543186 Query 11383 TTTCCAGCTTTCGCTAGTGGCCAGACTGA 11411 |||||||||||||| ||||| | |||| Sbjct 61543187 GTTCCAGCTTTCGCTCGTGGCGATGCTGA 61543215 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 208499136472900