Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xiphophorus_20hellerii_20[genbank_20GCA_5F001443345.1_202015-11-13] 25 sequences; 733,802,474 total letters Query= NC_007051.1 Length=41318 Score E Sequences producing significant alignments: (Bits) Value seq18 113 1e-20 >seq18 Length=80077792 Score = 113 bits (124), Expect = 1e-20 Identities = 131/176 (74%), Gaps = 3/176 (2%) Strand=Plus/Plus Query 39984 CATCCTGCAAGCGCAGGGCATGGACTAAACCTACAAAAAGGCGGACATATTATTGTGTGG 40043 || || || || ||||| ||||| ||||| ||||||| || || ||| | | |||||| Sbjct 57514880 CACCCAGCTAGTGCAGGACATGGTCTAAATTTACAAAAGGGAGGTCATCATTTAGTGTGG 57514939 Query 40044 TTTGGGTTAACTTGGTCTTTAGAATTGTATCAGCAAGCCAATGCTAGATTGTACCGACAA 40103 |||||||||||||||||| | ||| | || || ||| ||||||||||| | | || ||| Sbjct 57514940 TTTGGGTTAACTTGGTCTCTTGAACTTTACCAACAAACCAATGCTAGACTTTGGCGTCAA 57514999 Query 40104 GG---ACAAACACACACAACAATCATACATCACATTATGACAGATAATACAATTGA 40156 || |||| || ||||| || || || || ||| | || || ||||||||| Sbjct 57515000 GGGCAACAATCAAACACAGTCATTATTCAGCATATTGTAACGGAAGGTACAATTGA 57515055 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 132095960784000