Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xiphophorus_20hellerii_20[genbank_20GCA_5F001443345.1_202015-11-13] 25 sequences; 733,802,474 total letters Query= NC_008717.1 Length=36415 Score E Sequences producing significant alignments: (Bits) Value seq18 102 2e-17 >seq18 Length=80077792 Score = 102 bits (112), Expect = 2e-17 Identities = 89/111 (80%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 4522 GGTCGAGCTGATTCGTGATCTGTACGAGTCCAGCCAAGCCTCCATCTTGCTGATCGGCGA 4581 |||||||||| | || || | |||||| |||||||||| | | || || | ||||| Sbjct 74489955 GGTCGAGCTGGTGCGCGACATCTACGAGGGCAGCCAAGCCCCGCTGATGTTGGTGGGCGA 74489896 Query 4582 GGAAATGCTGCCGACCAAGCTGAAGAAGTTCGAACGCTTCCATGGCCGCGT 4632 ||| ||| ||||||||||||| ||||| |||||||| ||||| |||||||| Sbjct 74489895 GGAGATGTTGCCGACCAAGCTCAAGAAATTCGAACGTTTCCACGGCCGCGT 74489845 Score = 80.6 bits (88), Expect = 6e-11 Identities = 121/172 (70%), Gaps = 0/172 (0%) Strand=Plus/Plus Query 13551 ACGAAGCCATTGCGGCGCCGCGTGGTAATGCCAAGTCCACCCTGGTGAGCCAGATATTCG 13610 |||| || | || || ||||| || | || || || || ||||| | || | || Sbjct 71677734 ACGAGGCAACCGCCGCCCCGCGCGGCGAGGCGAAATCGACGCTGGTTACGCAACTGTTTA 71677793 Query 13611 TGATCTGGTGCGTACTCACCGGCCGCAAGCATTACCCCCTGATCATCATGGATGCCTTCG 13670 | | |||||||| | || || |||||||||||| | | ||| | ||||| ||| Sbjct 71677794 CGCTTTGGTGCGTGGTAACGGGGCGCAAGCATTACGCGGTCATCGTGATGGACAGTATCG 71677853 Query 13671 AACAGGCCGCCACGATGCTGGAGGCGATCAAGGCGGAGCTGGAGTTCAACCC 13722 | || ||| | ||||||||||| ||||||||||| || ||||||||||| Sbjct 71677854 ACCAAGCCTATCCCATGCTGGAGGCAATCAAGGCGGAACTTGAGTTCAACCC 71677905 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 116406365441850