Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xiphophorus_20hellerii_20[genbank_20GCA_5F001443345.1_202015-11-13] 25 sequences; 733,802,474 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq6 105 6e-18 >seq6 Length=22489619 Score = 105 bits (116), Expect = 6e-18 Identities = 120/161 (75%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 20237 AGACCAGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGA 20296 || || |||| || |||| ||| || || | || | ||||||||| ||||| ||||| Sbjct 14545859 AGTCCTGTAATGTGTGCAATCATGTAGGTGAGAAGTGCATAGCTGGCGATGTTGAAAGGC 14545800 Query 20297 ACTCCCAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCT 20356 || |||| ||||||||| | || | ||| |||||||||||||| ||||| ||||| Sbjct 14545799 ACCCCCAGACCCATGTCGGCGGAGCGCTGGTACAGCTGACAGGACAGCTCCCCGTCGCAG 14545740 Query 20357 ACATAAAATTGACATAACAAGTGACAGGGCGGAAGCGCCAT 20397 || || || ||||| | ||| ||||| || |||||||| Sbjct 14545739 ACGTAGAACTGACAGAGGGCGTGGCAGGGGGGCAGCGCCAT 14545699 Score = 82.4 bits (90), Expect = 7e-11 Identities = 111/150 (74%), Gaps = 6/150 (4%) Strand=Plus/Minus Query 20521 GTCCACGTACGCCGCCCCAAAGTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCCC 20580 |||| |||| | || || ||||||||||| |||||||| || |||||||||| ||||| Sbjct 14544976 GTCCTTGTACTCTGCACCGAAGTGCCTCCATTGGAAACCATACACAGGTCCCAGGTCCCC 14544917 Query 20581 CTC--CCTTCTGTGCGCCAGGCCGCGCCCGGCCAGGAACTCCCTGGAGCCATTTTTGTCC 20638 ||| || ||| || | | ||| | | ||| ||| || | ||| || || |||| Sbjct 14544916 CTCCTCCCTCTCTGTG--AAGCCCAGGTTGTCCAAGAAGTCACGGGACCCGTTGGCGTCC 14544859 Query 20639 CATATCTTGACTCCTGTTCT-TGAAAGCTC 20667 || ||||| |||||| |||| ||| ||||| Sbjct 14544858 CAGATCTTCACTCCT-TTCTCTGACAGCTC 14544830 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441372662071000