Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xiphophorus_20hellerii_20[genbank_20GCA_5F001443345.1_202015-11-13] 25 sequences; 733,802,474 total letters Query= NC_009762.3 Length=47785 Score E Sequences producing significant alignments: (Bits) Value seq18 102 2e-17 >seq18 Length=80077792 Score = 102 bits (112), Expect = 2e-17 Identities = 134/180 (74%), Gaps = 7/180 (4%) Strand=Plus/Plus Query 22011 ACATCCAGCGAGTGCAGGACATGGATTAAACTTACAACAAGGTGGACACATCATT--GTT 22068 ||| ||||| |||||||||||||| |||| |||||| | || || ||||||| || Sbjct 57514879 ACACCCAGCTAGTGCAGGACATGGTCTAAATTTACAAAAGGGAGG--TCATCATTTAGTG 57514936 Query 22069 TGGTTTGGACTTACATGGTCGTTGGAACTATATCAACAAGCAAATGCTAGATTATATAGA 22128 |||||||| | || ||||| | ||||| || |||||| | ||||||||| | | | Sbjct 57514937 TGGTTTGGGTTAACTTGGTCTCTTGAACTTTACCAACAAACCAATGCTAGACTTTGGCGT 57514996 Query 22129 CAAGGACAA-AATCATACA-ACT-ATTATTCATCATATTATGACCGATAATACGATAGAT 22185 ||||| ||| ||||| ||| | | |||||||| |||||| | || || ||| || ||| Sbjct 57514997 CAAGGGCAACAATCAAACACAGTCATTATTCAGCATATTGTAACGGAAGGTACAATTGAT 57515056 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 152790354640350