Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xiphophorus_20hellerii_20[genbank_20GCA_5F001443345.1_202015-11-13] 25 sequences; 733,802,474 total letters Query= NC_009815.1 Length=38124 Score E Sequences producing significant alignments: (Bits) Value seq18 84.2 5e-12 >seq18 Length=80077792 Score = 84.2 bits (92), Expect = 5e-12 Identities = 108/149 (72%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 34957 GACCCTGATTTACGTTACACTCCAGCCGGCGCGGCTGTTGCGACTTTTACGCTAGCAGTA 35016 ||| |||| || ||||| || ||| | | || |||||||||||||| || |||||| Sbjct 59386122 GACGCTGAGTTGCGTTATACCCCATCAAATGTAGCAGTTGCGACTTTTACTCTTGCAGTA 59386063 Query 35017 AATCGTATGTTCACTAATCAAAACGGAGAACGAGAAGCAGATTTCATTAATTGTGTTGTT 35076 || |||| ||| | | |||||| || ||||| || || ||||| || ||| || | Sbjct 59386062 AACCGTACGTTTAAGAGTCAAAATGGCGAACGTGAGGCTGATTTTATCAATGTCGTGATG 59386003 Query 35077 TGGCGCAAACCAGCAGAAAACGTTGCTAA 35105 ||||| ||| || ||||| ||||||| Sbjct 59386002 TGGCGTCAACAGGCTGAAAATCTTGCTAA 59385974 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 121875163818300