Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xiphophorus_20hellerii_20[genbank_20GCA_5F001443345.1_202015-11-13] 25 sequences; 733,802,474 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq25 255 6e-63 >seq25 Length=32766887 Score = 255 bits (282), Expect = 6e-63 Identities = 1030/1607 (64%), Gaps = 49/1607 (3%) Strand=Plus/Minus Query 93718 TACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGG 93777 ||| | | ||| | |||||| ||||||||| || ||||| || ||||| | || | Sbjct 10521461 TACAACTTCTTCGGCTTCAAGACTCTGGAGCGTTCCTACCTGCTGAAGATCAACGGGAAA 10521402 Query 93778 GTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGAC 93837 || ||||||||||||| || |||| ||| | || | | ||||| ||||| | ||| Sbjct 10521401 GTGGCCGAGCGACCGCAGCACATGCTCATGAGGGTGTCGGTTGGGATCCACGGGCGAGAC 10521342 Query 93838 AT----GCCGAATGTTTTGCGGG-CTTTCAGAGACATGCGGGACAAGAGGTATACCATGG 93892 || |||| || || | | | || | || ||| ||| ||| ||| | Sbjct 10521341 ATCGACGCCGCC-GT----CGAGACCTACAACCTCCTGTCGGAGAAGTGGTTCACCCACG 10521287 Query 93893 CCACCCCGACCCTGTTCAACGCGGGGACC--CCGGTGCCACAGATGTCTTCGTGTTTCCT 93950 || | |||||||| |||||||| |||||| |||| || ||| |||| || ||||| Sbjct 10521286 CCTCTCCGACCCTCTTCAACGCCGGGACCAACCGG--CCGCAGCTGTCCAGTTGCTTCCT 10521229 Query 93951 GATGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGAC 94010 | | | | |||| |||| |||| || || | ||||| ||| ||| | || ||| Sbjct 10521228 GCTCGCCATGAAGGACGACAGCATCGAAGGCATCTACGACACCCTGAAGCAGTGCGCGCT 10521169 Query 94011 CATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTC 94070 ||| || || | ||| || || ||||| | || | | | || | | ||| Sbjct 10521168 CATTTCCAAGTCCGCTGGCGGGATCGGCGTGGCGGTGAGCTGCATCCGATCGACGGGAAG 10521109 Query 94071 CTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAA 94130 ||||||| || ||||| |||| ||||||||| | || || ||||| | || | ||| Sbjct 10521108 CTACATCGCAGGCACCAACGGCAACTCCAACGGGTTGGTGCCGATGCTGAGAGTTTACAA 10521049 Query 94131 CAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTA 94190 |||| | || || ||||| |||||||| || | ||| || | ||||| | || Sbjct 10521048 CAACACCGCTCGGTACGTTGACCAGGGCGGCAACAAGAGACCCGGGGCCTTCGCCATGTA 10520989 Query 94191 TCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAA 94250 ||| ||||| |||||| |||||| | ||| | || ||| |||||| || || Sbjct 10520988 TCTGGAGCCATGGCACTTCGACGTGTTCGACTTCCTGGAGCTGAAGAAGAACACAGGAAA 10520929 Query 94251 CGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAA 94310 || | |||| ||||||||||| |||||||| | ||| | || ||||| || ||||| Sbjct 10520928 GGAGGAGCAGAGAGCCAGAGACCTTTTCTACGCCTTGTGGATCCCTGACCTGTTCATGAA 10520869 Query 94311 ACGCGTCGAGAAAAACTCCGCCTGGAGTCTTT--TTTGTCCCAATGAATGTCCCGGACTG 94368 | || |||| ||| | |||| || || | ||||||| || ||||| || ||| Sbjct 10520868 GAGAGTGGAGAGCAACCAGGACTGG--TCCTTGATGTGTCCCAGCGAGTGTCCTGGGCTG 10520811 Query 94369 TCCGACGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAG 94428 ||| || ||| | || || | | || | || || | | || | Sbjct 10520810 GACGAGTGCTGGGGAGAGGAGTTCGAGAAGCTCTACACCAAATATGAGAAGGAAGGGAGA 10520751 Query 94429 GCCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAG 94488 | | | ||| || | || | |||| ||| | ||| | || ||| || Sbjct 10520750 GTGAAAAGGGTGGTGAAGGCGCAGCAGCTCTGGTACGCCATCATCGAGTCCCAGACCGAA 10520691 Query 94489 ACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCAC 94548 || || || |||||||| | | ||||||| || |||| ||| |||||||||| || Sbjct 10520690 ACCGGGACCCCCTACATGCTCTACAAGGACGCTTGCAACAGGAAGAGCAACCAGCAGAAC 10520631 Query 94549 CTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGAC 94608 || || |||||| || || || ||||| ||| | || ||||| || |||| Sbjct 10520630 CTGGGCACCATCAAGTGCAGCAACCTCTGCACGGAGGTGGTGGAGTACACCAGCAAGGAC 10520571 Query 94609 GAGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTAC 94668 ||| | || || || ||||||| ||||||| ||| | || | || || | ||| Sbjct 10520570 GAGGTGGCCGTCTGCAACCTGGCCTCCATCGCCCT--CAACAT--GTACGTCACGCCAGA 10520515 Query 94669 ACGTCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGG--ATGGTCT 94726 || ||| ||||| | || |||| | | || | |||| || || Sbjct 10520514 GCGG--ACT------TTCGACTTCAAGAAGCTGGCCTCCGTCACC--AAGGTAATCGTGA 10520465 Query 94727 TGAACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAA 94786 ||||| |||| | | ||||||| |||| |||||| || || || || |||| || | Sbjct 10520464 AAAACCTCAACAAGATCATCGACATCAACTACTACCCGGTTCCCGAAGCCGAGACTTCCA 10520405 Query 94787 ACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGA 94846 || | || |||| ||||| ||||||||||||||| | || ||||| | | ||| Sbjct 10520404 ACAAGCGCCACAGGCCGATCGGGATCGGCGTCCAGGGTCTGGCCGACGCCTTCATCCTGA 10520345 Query 94847 TGCGTCTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAAGCA 94906 |||| | || | ||| | ||| || | | || | | || ||||| | || Sbjct 10520344 TGCGGCACCCTTTCGAAAGTCCCGAAGCTCAGCTGCTCAACATCCAGATGTTCGAGACCA 10520285 Query 94907 TTTATTACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCG-----GACGGCGGGCC 94961 | || ||| ||| || | | ||| || | || ||| || ||| || Sbjct 10520284 TCTACCACGCCGCCCTGGA-------GGCCAGCTG-CGAGCTCGCCGCAGAGCTCGGCCC 10520233 Query 94962 ACACGAATCGTTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGG 95021 |||| ||| | || |||||| | ||||||| | |||| |||| | |||| Sbjct 10520232 CTACGAGACGTACGAGGGCTCGCCCGTCAGCAAGGGCATCCTCCAGTACGACATGTGGGA 10520173 Query 95022 TGTGAAGCCCTCGGGTCTGTACGACTGGGAAGCT-CTACGCGCTGATGTTATCAAACACG 95080 || ||| | | || | |||||| ||||| || | | | |||||||| Sbjct 10520172 GAAGACGCCGACCGACCTTTGGGACTGG-AAGCTGCTGAAGGAAAAGATCGGCAAACACG 10520114 Query 95081 GTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTG 95140 | |||| ||| ||||| |||| |||||||||||||| ||||| || |||||||| | Sbjct 10520113 GCGTGAGGAACAGCCTGCTGCTGGCGCCCATGCCCACGGCGTCCACCGCCCAGATCCTGG 10520054 Query 95141 GCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCG 95200 ||||||||||||| |||| | | |||| |||| | |||| | | ||||||| ||| Sbjct 10520053 GCAACAACGAGTCCATCGAGGCGTACACCAGCAACATCTACACCCGCAGGGTGCTGTCCG 10519994 Query 95201 GGGAATTCCCCGTCATCAACAAGCACCTCCTACGGGACCTGACGTCTCTGGGTGTGTGGG 95260 | || |||| || ||||| |||||||| ||| |||||| | || ||||| Sbjct 10519993 GAGAGTTCCAGATCGTCAACCCTCACCTCCTCAAGGATCTGACGGAGCGCGGCCTGTGGA 10519934 Query 95261 GTGACAAGGTCAAGAACCAACTGCTACGCGCCAACGGCTCCGTCCAG 95307 || || | |||||| | ||| | | |||||| ||| ||||| Sbjct 10519933 ACGAGGAGATGAAGAACAAGCTGATCGCCAACAACGGATCCATCCAG 10519887 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494723045399000