Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xiphophorus_20hellerii_20[genbank_20GCA_5F001443345.1_202015-11-13] 25 sequences; 733,802,474 total letters Query= NC_013644.1 Length=37856 Score E Sequences producing significant alignments: (Bits) Value seq18 95.1 3e-15 >seq18 Length=80077792 Score = 95.1 bits (104), Expect = 3e-15 Identities = 135/187 (72%), Gaps = 5/187 (3%) Strand=Plus/Plus Query 16483 GCAGGCCACGGCCTAAATTTACAAAAAGGCGGGCA-CATTATCGTATGGTTTGGGCTTAC 16541 ||||| || || |||||||||||||| || || || |||| | || ||||||||| | || Sbjct 57514892 GCAGGACATGGTCTAAATTTACAAAAGGGAGGTCATCATT-TAGTGTGGTTTGGGTTAAC 57514950 Query 16542 GTGGTCTTTGGAGTTTTATCAACAAGCCAATGCCAGGTTAGACCGCCAAGG---ACAAAC 16598 |||||| | || |||| |||||| ||||||| || | || ||||| |||| | Sbjct 57514951 TTGGTCTCTTGAACTTTACCAACAAACCAATGCTAGACTTTGGCGTCAAGGGCAACAATC 57515010 Query 16599 ACAGCCTGTTATTATTCATCATTTAGTGACGAAAGGAACTATCGACGAACAAGTAATCAA 16658 | | | || |||||||| ||| | || ||| |||| || || || || | | | || Sbjct 57515011 AAACACAGTCATTATTCAGCATATTGTAACGGAAGGTACAATTGATGATGATATTCTAAA 57515070 Query 16659 AGCTTTA 16665 ||||||| Sbjct 57515071 AGCTTTA 57515077 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 121017564072900