Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xiphophorus_20hellerii_20[genbank_20GCA_5F001443345.1_202015-11-13] 25 sequences; 733,802,474 total letters Query= NC_014459.1 Length=59798 Score E Sequences producing significant alignments: (Bits) Value seq18 152 2e-32 >seq18 Length=80077792 Score = 152 bits (168), Expect = 2e-32 Identities = 225/317 (71%), Gaps = 4/317 (1%) Strand=Plus/Minus Query 54382 TGTCGCACTCCCCGAAGTGGCGGGAGCAGCTCGGCACGCTGGGCGGCGGCAATCACTTCA 54441 ||||||| || ||||||||||| ||||| | || || |||| || || || || |||| Sbjct 70158310 TGTCGCATTCGCCGAAGTGGCGTCAGCAGTTAGGTTCGTTGGGTGGTGGTAACCATTTCA 70158251 Query 54442 TCGAGCTGTGCCTCGACCACCTCGACCGGGTGTGGTTGTTCCTGCACTCCGGTTCTCGTG 54501 | || |||| | ||| | | ||||| |||||| ||||||||||||||||||| || | Sbjct 70158250 TTGAATTGTGTTTGGACGAGCAGGACCGCGTGTGGATGTTCCTGCACTCCGGTTCCCGCG 70158191 Query 54502 GTGTCGGTAACAAGATCGCGCAGAAGCACATTCAGGCCGCGCAGGGCTATTGCCTCGCCA 54561 |||| || |||||||| || ||||||||||| || || || || || | || Sbjct 70158190 GTGTGGGCAACAAGATTGCAAAGAAGCACATTAAGATTGCCCA--GCGTCTGTGTGAGCA 70158133 Query 54562 ACG--GGCTGCACGTGCCGCACAAGGATCTGGCGTACCTCGTCGAGGGCACGGTCGAGTT 54619 | || | | | |||| |||||||| |||||||| | || |||| || ||||| Sbjct 70158132 GTGGTGGATTCCCCTGCCCAACAAGGATTTGGCGTACTTGGTGCAGGGGACCCCAGAGTT 70158073 Query 54620 CGACCGCTACCTCGTCGAACTGCGCTGGGCGCAGCGGTTCGCGTACTACAACCGCGCCGA 54679 | | || || || || |||||||||||||| || | | |||||| | || Sbjct 70158072 CAAGGCTTATCTGCAGGATTTGAAGTGGGCGCAGCGGTTTGCCTTCCTCAACCGTGAGGA 70158013 Query 54680 AATGATGGACCGATTCG 54696 |||||||||||| |||| Sbjct 70158012 AATGATGGACCGTTTCG 70157996 Score = 86.0 bits (94), Expect = 2e-12 Identities = 67/80 (84%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 972 GCGCCTGGGTGCGTAGCTCAATCGGTAGAGCAGCGGTCTCCAAAGCCGCCGGTTGCACGT 1031 |||| | || |||||||||||| || |||||||||||||||||| |||| ||||||| || Sbjct 68267899 GCGCATAGGGGCGTAGCTCAATTGGCAGAGCAGCGGTCTCCAAAACCGCAGGTTGCAGGT 68267958 Query 1032 TCGAGTCGTGCCGCGCCCGC 1051 || |||| || ||| || || Sbjct 68267959 TCAAGTCCTGTCGCCCCTGC 68267978 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 191231943228000