Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xiphophorus_20hellerii_20[genbank_20GCA_5F001443345.1_202015-11-13] 25 sequences; 733,802,474 total letters Query= NC_021073.1 Length=107218 Score E Sequences producing significant alignments: (Bits) Value seq18 87.8 1e-12 >seq18 Length=80077792 Score = 87.8 bits (96), Expect = 1e-12 Identities = 136/192 (71%), Gaps = 8/192 (4%) Strand=Plus/Plus Query 6214 CCGATGTTCAACTGCTGTTTGGTCGATCTTAAAGGTATGTTGGCGAATGGGTTTATGATG 6273 |||||| ||||||||||||| | ||| ||||||| ||| ||| ||||| |||| ||| Sbjct 65717871 CCGATGACCAACTGCTGTTTGATTGATTTTAAAGGCATGCTGGAAAATGGTTTTAAGATT 65717930 Query 6274 GGTAACGCAGACATCGAAACCCCTAAGTCAATCTCAACTGCGTGTGCTATCACTGCACAA 6333 || || ||||| | || | || ||||| ||| |||||| ||| | | ||||| Sbjct 65717931 GGGAATGCAGAGGTAGAGAGTCCCAAGTCTATCCAGACTGCGACAGCTCAAATTTCACAA 65717990 Query 6334 ATTATCGCTCAGGTTGCGTGCCACCAATACGGTGGGGTTAGCCTCA----ATCGTCTTGA 6389 || ||||| | ||||| | ||| |||| |||||| |||| | ||| |||| Sbjct 65717991 ATCATCGCCAATGTTGCTTCTAGCCAGTACG--GGGGTT--GCTCAGCTGACCGTATTGA 65718046 Query 6390 TGAGGTGTTGGC 6401 ||| || ||||| Sbjct 65718047 TGAAGTCTTGGC 65718058 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 342972695500475