Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xiphophorus_20hellerii_20[genbank_20GCA_5F001443345.1_202015-11-13] 25 sequences; 733,802,474 total letters Query= NC_021298.1 Length=51252 Score E Sequences producing significant alignments: (Bits) Value seq18 80.6 9e-11 >seq18 Length=80077792 Score = 80.6 bits (88), Expect = 9e-11 Identities = 94/127 (74%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 39938 GTTCTCCAGGTCGACGTGCTCCCCACGGTTGAGGCGGATGTTCTCGACCGCGTCGCCCAT 39997 ||| |||||||||| | || | ||||||| |||||| || | |||||||| || Sbjct 75431653 GTTTTCCAGGTCGATGGTTTCGTCCCGGTTGATTTTGATGTTTTCCAAGGCGTCGCCGAT 75431712 Query 39998 GATCGTGAGGTTCCGGAGCCCGAGGAAGTCCATCTTCAGCAGGCCCAGAGCCTCGCAGCT 40057 || |||||||| || | || ||||||||||| || |||||||| | || |||||| Sbjct 75431713 GACTGTGAGGTTGCGCAAACCCAGGAAGTCCATTTTGAGCAGGCCGATGGCTTCGCAGGC 75431772 Query 40058 CGGGTAG 40064 |||||| Sbjct 75431773 TGGGTAG 75431779 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 163884751346700