Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xiphophorus_20hellerii_20[genbank_20GCA_5F001443345.1_202015-11-13] 25 sequences; 733,802,474 total letters Query= NC_021539.2 Length=38275 Score E Sequences producing significant alignments: (Bits) Value seq18 84.2 5e-12 >seq18 Length=80077792 Score = 84.2 bits (92), Expect = 5e-12 Identities = 106/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 9425 CAGAAGTTTTTGGAACAAAAGGTGCGCCACGGATGGTCAAAGCCATTGAGGATGGTCGTT 9484 |||| | |||||||| || ||||| ||||| ||||| | || ||| | |||| || Sbjct 59761885 CAGATATATTTGGAACTAAGGGTGCTCCACGAATGGTGGATGCTATTAATCGTGGTGCTT 59761826 Query 9485 TAAGTCTCGATGGCTTAGCAGGAACAGCAGAAATAGCAACAGGCACTGTTTCTAAAACAT 9544 || | | |||| |||||| | ||||||| | | |||| |||| || || ||| | Sbjct 59761825 TATCTTTTGATGACTTAGCTGAAACAGCAAAGAAAGCATCAGGAACAGTCGGCTCAACTT 59761766 Query 9545 TTGAAGCAACACTGGATCCAATTGAT 9570 |||||| ||||| |||||||||||| Sbjct 59761765 ATGAAGCGACACTAGATCCAATTGAT 59761740 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 122358363674850