Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xiphophorus_20hellerii_20[genbank_20GCA_5F001443345.1_202015-11-13] 25 sequences; 733,802,474 total letters Query= NC_021558.1 Length=37644 Score E Sequences producing significant alignments: (Bits) Value seq18 140 8e-29 >seq18 Length=80077792 Score = 140 bits (154), Expect = 8e-29 Identities = 142/185 (77%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 5860 ATGGAACGTATTCGTTCCGGTTTGCTTGGTAATACAGAGGCGATTGAGGACCTGGGCATC 5919 ||||| |||||||| || |||||||| || || || || || ||||||||||| || ||| Sbjct 30090184 ATGGAGCGTATTCGCTCAGGTTTGCTAGGGAACACCGAAGCAATTGAGGACCTAGGAATC 30090125 Query 5920 AACGTTAACGTTGCAATGATCGAATCAACAAAAGCATTCCAGCAGTTTGCTAACGGTAAG 5979 |||||| || || ||||| ||||| || |||| || || |||| || ||||| || Sbjct 30090124 AACGTTGGAGTGGCCATGATTGAATCCACTGAAGCCTTTAAGAAGTTCGCAAACGGACAG 30090065 Query 5980 AGTTGGCAACAACTTAACTTCCAAACACAGCAACAAATTCGTTTGATGGCGATTCTTGAA 6039 || |||||||| | | | ||||| ||||||||||| || ||||||||||||| || Sbjct 30090064 AGCTGGCAACAGTTGGATTATCAAACCCAGCAACAAATCCGCCTGATGGCGATTCTGGAG 30090005 Query 6040 CAAGC 6044 || || Sbjct 30090004 CAGGC 30090000 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 120339164274300