Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xiphophorus_20hellerii_20[genbank_20GCA_5F001443345.1_202015-11-13] 25 sequences; 733,802,474 total letters Query= NC_021861.1 Length=30910 Score E Sequences producing significant alignments: (Bits) Value seq18 86.0 1e-12 >seq18 Length=80077792 Score = 86.0 bits (94), Expect = 1e-12 Identities = 150/216 (69%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 5026 TATACTCCACAAAATCAAGCTACAGCAACTTTCTCGCTTGCAGTGAGTCGCTCTTTCAAA 5085 ||||| ||| |||| ||| || ||||| | |||||||| | || | || || Sbjct 59386107 TATACCCCATCAAATGTAGCAGTTGCGACTTTTACTCTTGCAGTAAACCGTACGTTTAAG 59386048 Query 5086 AATGCCAATGGAGAACGTGAAACAGATTTTATTAACTGT-GTTATCTGGCGACAACAAGC 5144 | | ||||| |||||||| | |||||||| || ||| || || ||||| ||||| || Sbjct 59386047 AGTCAAAATGGCGAACGTGAGGCTGATTTTATCAA-TGTCGTGATGTGGCGTCAACAGGC 59385989 Query 5145 TGAAAATATGGCAAATTTCACACATAAAGGAAGCTTGATTGGTATCACTGGTAGAATCCA 5204 ||||||| | || || | | | ||||| | || || ||||| || | ||||| Sbjct 59385988 TGAAAATCTTGCTAACTGGGCTAAAAAAGGCTCTCTTATCGGGATCACAGGCCGTATCCA 59385929 Query 5205 AACTCGAAACTATGAAAATCAACAAGGACAACGTGT 5240 ||||| | || || || || |||||||||||||| Sbjct 59385928 GACTCGTAGTTACGATAACCAGCAAGGACAACGTGT 59385893 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 98790370671600