Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xiphophorus_20hellerii_20[genbank_20GCA_5F001443345.1_202015-11-13] 25 sequences; 733,802,474 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq16 96.9 3e-15 >seq16 Length=24388307 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 107553 AAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCT 107612 || ||||| ||||| || ||||| | || || || ||||| ||| | || |||| | Sbjct 2613043 AAGATGCAGATTTTCGTGAAAACCCTCACTGGGAAGACCATCACCCTGGAGGTGGAGCCC 2613102 Query 107613 GGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGAT 107672 | ||||| | | | || || ||||||| |||||||||||| | || || Sbjct 2613103 AGTGATACCATTGAGAACGTGAAGGCAAAGATTCAGGATAAAGAAGGCATTCCTCCTGAC 2613162 Query 107673 CAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTAC 107732 |||||||| || || | ||| || ||||||||||| || | | || || |||||||| Sbjct 2613163 CAGCAGAGGCTGATCTTTGCTGGCAAACAGCTGGAAGATGGCCGCACCCTGTCGGACTAC 2613222 Query 107733 AACATTCAAAAGGAGTCTACGTTGCACATGGTG 107765 ||| | || |||||||| || | ||| ||||| Sbjct 2613223 AACGTCCAGAAGGAGTCCACCCTCCACCTGGTG 2613255 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398876678467225