Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xiphophorus_20hellerii_20[genbank_20GCA_5F001443345.1_202015-11-13] 25 sequences; 733,802,474 total letters Query= NC_023572.1 Length=42240 Score E Sequences producing significant alignments: (Bits) Value seq18 80.6 7e-11 >seq18 Length=80077792 Score = 80.6 bits (88), Expect = 7e-11 Identities = 207/308 (67%), Gaps = 8/308 (3%) Strand=Plus/Minus Query 3620 GGCGTATGCAAGCGTATTCGGCAATATCGACAGCTACGGCGATGTCGTTGTCAGGGGCGC 3679 |||||| || || ||||||||| || ||||| ||||| ||| | ||||| Sbjct 46293543 GGCGTACGCCTCGGTGTTCGGCAATCGGGATTCGTACGGGGATGTAGTTATGCCTGGCGC 46293484 Query 3680 ATTCGCCGACGACCTCGCTCGG-TGGGAGAAGTCCGGCAACCCGATCCCGGTGCTGTTCG 3738 ||| | || |||| | | |||| | | || || || |||| || |||||| || Sbjct 46293483 ATTTACTGA-GACCCTTCAGGAATGGGCGGAATCAGGGAATGCGATTCCCCTGCTGTACG 46293425 Query 3739 GGCACAACATGGGTGACCCTGACTACAACATCGGCCACGT--CGTCGACGCCAAGGAGGA 3796 | || || | |||||||| | ||| |||||| || | || || | |||||| Sbjct 46293424 GCCATGACTTTGGTGACCCATTCAGCAATATCGGCGCGGTTACTTCCGCGTC--GGAGGA 46293367 Query 3797 CGACAACGGCCTACTGGTCACCGTGCAGC-TCGACCTCGAAAACCCCAAGGCCAAGCAGG 3855 || | || || | || | |||| | ||||| || ||| ||||||| ||||||| Sbjct 46293366 TGAGCATGGGCTGAAAATAACAGC-CAGCCTTGACCTTGACAACGCCAAGGCTAAGCAGG 46293308 Query 3856 TTTACCGGTTGCTCAAGGGCCGACGCATCAACCAGATGTCGTTTGCCTACGACGTGATCG 3915 | |||||| ||||||| | ||||| | | |||||| |||||||||||| | || | Sbjct 46293307 TGTACCGGCTGCTCAAAGAGCGACGGCTGACACAGATGAGCTTTGCCTACGACATTATTG 46293248 Query 3916 AGGGCGGC 3923 | |||||| Sbjct 46293247 ACGGCGGC 46293240 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 135046359908100