Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xiphophorus_20hellerii_20[genbank_20GCA_5F001443345.1_202015-11-13] 25 sequences; 733,802,474 total letters Query= NC_023719.1 Length=497513 Score E Sequences producing significant alignments: (Bits) Value seq18 136 1e-26 >seq18 Length=80077792 Score = 136 bits (150), Expect = 1e-26 Identities = 291/435 (67%), Gaps = 0/435 (0%) Strand=Plus/Minus Query 188757 AAAATCTAATGTTCTTTTAGTTGGCCCTACTGGTTCAGGTAAAACATTATTTGCTCAAAC 188816 ||| || ||| || | || | || || || ||||| || ||||| | |||||||||| Sbjct 60339091 AAAGTCCAATATTTTGTTGCTCGGGCCAACCGGTTCCGGCAAAACCTACCTTGCTCAAAC 60339032 Query 188817 ATTGGCTGATATGTTACATGTACCTCTAGCTATCTCTGATGCAACTTCTTTAACAGAAGC 188876 |||| | | | | || || | || ||| | ||||| || || | || ||||| Sbjct 60339031 GCTGGCCAAGCTTCTCGACGTCCCGTTCGCCATCGCCGATGCCACCTCACTGACTGAAGC 60338972 Query 188877 TGGTTATGTAGGTGAAGATGTGGAAAACGTATTGCTTCGTTTAATCCAAGCAGCTGATTA 188936 ||| || || || ||||| |||||||| | |||| | | || ||| | ||||| Sbjct 60338971 TGGCTACGTGGGCGAAGACGTGGAAAATATTCTGCTCAAACTGCTTCAGGCATCCGATTA 60338912 Query 188937 CGATATCGAATTAGCGGAACGTGGAATTGTATATATCGATGAAGTAGATAAAATTGCTAG 188996 |||| | | ||| | || || || | || |||||||| || || || ||| | | Sbjct 60338911 CGATGTGCAGCGTGCGCAGCGCGGCATCATTTACATCGATGAGGTGGACAAGATTTCCCG 60338852 Query 188997 AAAATCAGAAAGCACATCCATTACCCGAGATGTATCTGGCGAAGGAGTACAGCAAGCTTT 189056 || || |||| | | || ||||| || ||||| || ||||| || || ||||| || || Sbjct 60338851 GAAGTCGGAAAACCCGTCGATTACTCGCGATGTCTCCGGCGAGGGTGTTCAGCAGGCGTT 60338792 Query 189057 ATTAAAAATCATTGAAGGTACAGTTGCGAAAGTTCCTCCTCAAGGTGGTCGTAAACACCC 189116 || || || | ||||| ||| || || || || || || || ||||||||||| Sbjct 60338791 GTTGAAGATTCTGGAAGGCACAACCGCCTCGGTGCCGCCGCAGGGAGGGCGTAAACACCC 60338732 Query 189117 TCACCAAGAAATGCTTGAAATAGATACAACTAATATCTTGTTTATTCTTGGTGGAGCGTT 189176 ||||||| | || | | ||||| | || || |||||| | | | ||| ||||| Sbjct 60338731 GAACCAAGATTTTATTCAGCTGGATACCTCCAACATTTTGTTTGTGGTGGCTGGCGCGTT 60338672 Query 189177 TGATGGTCTTGAAAA 189191 || ||| || || || Sbjct 60338671 TGCTGGCCTGGAGAA 60338657 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1591909890091200