Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xiphophorus_20hellerii_20[genbank_20GCA_5F001443345.1_202015-11-13] 25 sequences; 733,802,474 total letters Query= NC_026585.1 Length=60727 Score E Sequences producing significant alignments: (Bits) Value seq18 197 5e-46 >seq18 Length=80077792 Score = 197 bits (218), Expect = 5e-46 Identities = 171/212 (81%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 48101 CGATGAACGCCACATCTGGCCCTACGTACGGGAAGCAATTCGCCGAGTACGACCCCGATA 48160 |||||| || ||| | |||||||| || |||| |||||||||| |||||||||| || Sbjct 71688759 CGATGAGCGGCACCTATGGCCCTATGTCAGGGAGGCAATTCGCCACCTACGACCCCGCTA 71688818 Query 48161 CACGGTCCTGGAAAATGTGGCCGGACATCGGTCTCTGGGGTTCGATCGAGTACTCGGAGA 48220 || |||||||||||||||||||||| ||||| |||||||||||| |||||||||||| Sbjct 71688819 CATCTTCCTGGAAAATGTGGCCGGACACAGGTCTTTGGGGTTCGATCAAGTACTCGGAGA 71688878 Query 48221 CCTGGCCGAAGACGGGCTACATGTCCGATGGACGAGCATACGAGCTTCCGACATCGGAGC 48280 | ||||| | |||||||| |||| | ||||| ||| | |||||||||||||| || || Sbjct 71688879 CATGGCCAAGGACGGGCTGCATGCGTGGTGGACAAGCCTTCGAGCTTCCGACATTGGTGC 71688938 Query 48281 CCCACACCAGCGAGAGCGAGTGTTCCTCTTCG 48312 ||| || || || ||||| | ||| || ||| Sbjct 71688939 CCCGCATCACCGCGAGCGGCTTTTCATCCTCG 71688970 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 194204742345450