Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xiphophorus_20hellerii_20[genbank_20GCA_5F001443345.1_202015-11-13] 25 sequences; 733,802,474 total letters Query= NC_028936.1 Length=59052 Score E Sequences producing significant alignments: (Bits) Value seq18 149 2e-31 >seq18 Length=80077792 Score = 149 bits (164), Expect = 2e-31 Identities = 231/328 (70%), Gaps = 4/328 (1%) Strand=Plus/Minus Query 53047 GGTGTCGACCTGTCGCACTCGCCGAAGTGGCGTGAGCAGCTCGGCACGCTCGGCGGTGGC 53106 ||||| || ||||||| ||||||||||||||| ||||| | || || | || ||||| Sbjct 70158320 GGTGTGGATTTGTCGCATTCGCCGAAGTGGCGTCAGCAGTTAGGTTCGTTGGGTGGTGGT 70158261 Query 53107 AATCACTTCATCGAGTTGTGTGTCGACCACCTTGACCGTGTGTGGTTGTTCCTGCACTCC 53166 || || ||||| || |||||| | ||| | | ||||| |||||| |||||||||||||| Sbjct 70158260 AACCATTTCATTGAATTGTGTTTGGACGAGCAGGACCGCGTGTGGATGTTCCTGCACTCC 70158201 Query 53167 GGTTCGCGTGGTGTAGGCAACAAGATCGCGCAGCGGCATATCGCTGCGGCGCAGGGCTAC 53226 ||||| || ||||| ||||||||||| || || ||| || || || || | Sbjct 70158200 GGTTCCCGCGGTGTGGGCAACAAGATTGCAAAGAAGCACATTAAGATTGCCCA--GCGTC 70158143 Query 53227 TGCCACAACAACG--GCCTGCAGGTGCCTCACCCTGATCTGGCGTATCTCGTCGAGGGCA 53284 || | || | | | | |||| || ||| ||||||| | || |||| | Sbjct 70158142 TGTGTGAGCAGTGGTGGATTCCCCTGCCCAACAAGGATTTGGCGTACTTGGTGCAGGGGA 70158083 Query 53285 CGCCCGAGTTCGACTCGTACATCGTCGAGTTGCGGTGGGCGCAGCGGTTCGCGTACCTGA 53344 | || |||||| | | || | || ||| ||||||||||||||| || | ||| | Sbjct 70158082 CCCCAGAGTTCAAGGCTTATCTGCAGGATTTGAAGTGGGCGCAGCGGTTTGCCTTCCTCA 70158023 Query 53345 ACCGTGCCGAGATGCTGGATCGTTTCGC 53372 |||||| || ||| |||| |||||||| Sbjct 70158022 ACCGTGAGGAAATGATGGACCGTTTCGC 70157995 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 188844743936700