Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xiphophorus_20hellerii_20[genbank_20GCA_5F001443345.1_202015-11-13] 25 sequences; 733,802,474 total letters Query= NC_029013.1 Length=177688 Score E Sequences producing significant alignments: (Bits) Value seq18 113 5e-20 >seq18 Length=80077792 Score = 113 bits (124), Expect = 5e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 142051 CCGCCGTACTGGTGAGAAGCAATCTGTGCGGTGATCTGTGCCATAAGAGCAGTCGCAACA 142110 || ||||||||| |||||||| | ||| |||| |||| || |||| |||||| Sbjct 65718025 CCCCCGTACTGGCTAGAAGCAACATTGGCGATGATTTGTGAAATTTGAGCTGTCGCAGTC 65717966 Query 142111 CCGATTGATTTCGGGGGTTCGATGTCTGCGTTACCCATCTTGAAGCCATTAGCCAGCATA 142170 ||| || || || || | ||||| || || ||||| || ||||| ||||||| Sbjct 65717965 TGGATAGACTTGGGACTCTCTACCTCTGCATTCCCAATCTTAAAACCATTTTCCAGCATG 65717906 Query 142171 CCTTTCAAATCCACCAGACAGCAGTTTGTGTATGGCGTGAACGGGCTGTAATCCAGATCA 142230 ||||| ||||| | || ||||||||| || || ||| | |||||||| |||| ||| Sbjct 65717905 CCTTTAAAATCAATCAAACAGCAGTTGGTCATCGGAGTGTAGGGGCTGTAGTCCAAGTCA 65717846 Query 142231 TGATAGTGGATGTCGCC 142247 ||||||||||| || || Sbjct 65717845 TGATAGTGGATATCCCC 65717829 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 568473422352000