Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xiphophorus_20hellerii_20[genbank_20GCA_5F001443345.1_202015-11-13] 25 sequences; 733,802,474 total letters Query= NC_029119.1 Length=127726 Score E Sequences producing significant alignments: (Bits) Value seq18 125 6e-24 >seq18 Length=80077792 Score = 125 bits (138), Expect = 6e-24 Identities = 121/153 (79%), Gaps = 2/153 (1%) Strand=Plus/Plus Query 126221 TTGATATAATTGACAATTTAATTTACCCTCTTGTA-CGTAAAATTGAAACATTGTGTGGC 126279 |||||| |||||||||| |||||| || | ||||| | | |||||| |||||||| |||| Sbjct 70585605 TTGATACAATTGACAATCTAATTTTCCAT-TTGTAACTTTAAATTGGAACATTGTATGGC 70585663 Query 126280 AAGGTGGTAATGCCATTGAATCGATTTCAGTAGGATTCCATGCTGAAACAATGTGACGTC 126339 |||| || || ||||| ||| ||||| |||||||||| || |||| ||| |||| Sbjct 70585664 AAGGCGGCAAAGCCATATTATCAATTTCTTTAGGATTCCAAGCAGAAATAATCAATCGTC 70585723 Query 126340 GAGAGTTTGGATTGGTTTTAATTTGTTGTATAA 126372 ||||||||||| || ||||||| ||| |||| Sbjct 70585724 TTGAGTTTGGATTTGTCTTAATTTCTTGAATAA 70585756 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408598275505175