Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xiphophorus_20hellerii_20[genbank_20GCA_5F001443345.1_202015-11-13] 25 sequences; 733,802,474 total letters Query= NC_031023.1 Length=32649 Score E Sequences producing significant alignments: (Bits) Value seq18 134 3e-27 >seq18 Length=80077792 Score = 134 bits (148), Expect = 3e-27 Identities = 156/205 (76%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 26939 AATATCGCAGTAGCATCTTTCAGCCTTGCGGTTAACCGTAACTTTAAAGACGCTAAC-GG 26997 ||| | ||||| || |||| | ||||| || ||||||| ||||| || | || || Sbjct 59386095 AATGTAGCAGTTGCGACTTTTACTCTTGCAGTAAACCGTACGTTTAA-GAGTCAAAATGG 59386037 Query 26998 AGAGCGTGAAACTGACTTTATTAACTGT-GTCATTTGGCGACAACAGGCTGAAAATTTGG 27056 || ||||| |||| ||||| || ||| || || ||||| ||||||||||||||| | | Sbjct 59386036 CGAACGTGAGGCTGATTTTATCAA-TGTCGTGATGTGGCGTCAACAGGCTGAAAATCTTG 59385978 Query 27057 CTAATTGGGCTAAAAAAGGCGCATTAATTGGAATCACTGGACGTATTCAGACTCGTAGCT 27116 |||| ||||||||||||||| | | || || ||||| || ||||| ||||||||||| | Sbjct 59385977 CTAACTGGGCTAAAAAAGGCTCTCTTATCGGGATCACAGGCCGTATCCAGACTCGTAGTT 59385918 Query 27117 ATGAAAATCAACAGGGGCAACGAGT 27141 | || || || || || ||||| || Sbjct 59385917 ACGATAACCAGCAAGGACAACGTGT 59385893 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 104355169019550